ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3105_28

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 29929..30873

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic ribose-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YIM0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 304.0
  • Bit_score: 422
  • Evalue 4.30e-115
  • rbh
Periplasmic ribose-binding protein {ECO:0000313|EMBL:EHH06237.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 304.0
  • Bit_score: 422
  • Evalue 6.00e-115
ribose ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 304.0
  • Bit_score: 421
  • Evalue 2.30e-115
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium amorphae → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGTCATTAAAACAAAACCTGAAGAAGGCCGGTATCGCTCTTGCCGGAGCCGCTGCGATGGTGGCCATGTCGGGCGCGTCGTTCGCCGCCGACAAGATCCTGATCGGCTTCAGCCAGGGCACGCTCAACCATCCGTGGCGCGTGGCGATGGTCGAAGGCAACAAGAAGTACGCCGAAGAGCACTACAAGGACGTCGAGTTGGTCGTGACCGACGGCCAGAATGACTCGGCCAAGCAGGTTGCCGATGTCGAAAGCCTGATCGCGCGCGGCGTCAAGGTGCTGATGATCAGCCCGCTGACATCGGACGCCCTGACGCCTGTCGTGCAGCAGGCCCTCGACGCGGGCATCAAAGTGGTCACCATGGACCGCAAGGTCAACGTTCCGGTAACGGTGCATGTCGGCGCGCTCAACCTGCCGATCGGTGAATCTGCCGGCAAGTTCCTGGTCAAGGCACTCGACAACAAGGGCAAGGTGATCGAACTGCAGGGCACCGGCGGCGCTTCGGCGACCGTGGATCGTCATGACGGCTTCATGAAGGGCATCGAAGGGTCCGGGCTGGAAGTCGTCGCTTCCCAGAACTGCGATTATCTGCGCGAGAACGCGGTGAAGTTCATGGAAGACCAGTTGCAGCGCTTTGGCCCCGGCGAAATCCAGGCCGTCTATGCACACAATGACGAGATGGCGCTGGGCGCTATCCAGGCGCTCGAGGCCGCCAACCGCCTCGGCGAAGTGAAGGTCGTCGGCGTCGATGGCCAGAACAACGCTTTCGAAGCGATTGCCGCCGGCAAGCTCGCCGCCACCTTCACCTACCCCTATGTCGCGCCTGAAGGCATCGAGATCGCCTACAAGCTCGCAAAGGGTGAGAAGGTCGACGCCGAAGTCATTCTTCCCGGCAAGCAGATCGACGCGACCAACATCAAGGAAATGCTCGGCACGGGCTTCTGA
PROTEIN sequence
Length: 315
MSLKQNLKKAGIALAGAAAMVAMSGASFAADKILIGFSQGTLNHPWRVAMVEGNKKYAEEHYKDVELVVTDGQNDSAKQVADVESLIARGVKVLMISPLTSDALTPVVQQALDAGIKVVTMDRKVNVPVTVHVGALNLPIGESAGKFLVKALDNKGKVIELQGTGGASATVDRHDGFMKGIEGSGLEVVASQNCDYLRENAVKFMEDQLQRFGPGEIQAVYAHNDEMALGAIQALEAANRLGEVKVVGVDGQNNAFEAIAAGKLAATFTYPYVAPEGIEIAYKLAKGEKVDAEVILPGKQIDATNIKEMLGTGF*