ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3183_9

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(7252..7641)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 118.0
  • Bit_score: 232
  • Evalue 2.80e-58
RluA family pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 118.0
  • Bit_score: 228
  • Evalue 9.00e-58
UPI0003D06B86 related cluster n=1 Tax=unknown RepID=UPI0003D06B86 similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 9.80e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCGACCGTGTGCGTGTCGCCAAGCATGGCGAAAAGGGCGCGGAAGGGCGCGGATCATGCCGTGTCCTACTATCGCATCGTCGAACAGGCCGCGCAGACGCTAAGCTGGCTGGAAATGGAGCCCTATACCGGCCGCACCCATCAGTTGCGCGTTCATGCCGCATATCTCGGTTGCCCGATCATCGGCGATCCCAAATATTTCGAAGCCGACACCAATTGGGAATTTCCCGGCGGTGTCCAGAACCGTCTGCATCTGCATGCGCGCCGCATCGTCATCCCGCATCCGGACGGCGGCAATATCGATGTCACCGCACCGATGCCTCCCCACATGCGCCAGAGCTGGAACCTGATCGGCTTCGACATGCAAAGCGCTGAGGACGACGCTTGA
PROTEIN sequence
Length: 130
MATVCVSPSMAKRARKGADHAVSYYRIVEQAAQTLSWLEMEPYTGRTHQLRVHAAYLGCPIIGDPKYFEADTNWEFPGGVQNRLHLHARRIVIPHPDGGNIDVTAPMPPHMRQSWNLIGFDMQSAEDDA*