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SCNpilot_expt_1000_bf_scaffold_3183_17

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(14304..14672)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EB225 similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 122.0
  • Bit_score: 240
  • Evalue 9.00e-61
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 122.0
  • Bit_score: 241
  • Evalue 7.40e-61
30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 122.0
  • Bit_score: 238
  • Evalue 1.40e-60

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGGCTCGTATAGCCGGCGTCAACATTCCGACCAACAAGCGCGTCGTCATCGCGCTTCAGTACATTCACGGCATTGGCAAGAAGTTTGCTCAGGAGATCGTCGAGAAGGTCGGCATTCCTGCAGAGCGCCGCGTCAACCAGCTCACCGACGCCGAGGTTCTGGCGATCCGCGAAACCATCGACCGTGACTATCAGGTCGAAGGCGATCTGCGCCGCGAAGTTTCGATGAACATCAAGCGTCTGATGGACCTTGGCTGCTACCGCGGCCTGCGCCATCGCCGCAGCCTGCCGGTTCGTGGCCAGCGTACGCATACCAATGCGCGCACTCGCAAGGGTCCTGCCAAGGCAATCGCCGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 123
MARIAGVNIPTNKRVVIALQYIHGIGKKFAQEIVEKVGIPAERRVNQLTDAEVLAIRETIDRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGKKK*