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SCNpilot_expt_1000_bf_scaffold_3183_20

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(16291..16800)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecY n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVC5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 164.0
  • Bit_score: 295
  • Evalue 4.20e-77
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_1000_bf_scaffold_3183_19]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 164.0
  • Bit_score: 311
  • Evalue 8.00e-82

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGCTTCGGCTGCTGAACAACTTGCTTCCAATCTGAATTTTGCGGCCTTCGCCAAGGCCGAAGACTTGAAGAAGCGCATCTGGTTTACGCTGGGTGCGCTGTTCGTCTATCGGCTTGGCACTTACATTCCGCTGCCCGGTATCAACCCCGAAGCTTTTGCGCAGGCCTTCCAGCAGCAGAGCGGCGGCGTGCTTGGCATGTTCAACATGTTTGCCGGCGGCGCCGTCGAGCGCATGGCGATCTTCGCGCTTGGCATCATGCCGTACATTTCGGCGTCGATCATCATGCAGCTGATGACCTCGGTCATTCCCACTCTTGAGGCGCTCAAGAAGGAAGGCGAGCAGGGTCGCAAGATCATCAACCAGTATACCCGCTATGGCACGGTTCTGCTGGCCATCGTTCAGTCTTACGGAATCTCGGTAGGGCTCTCCAGCGGCAACAACATCGTTACCAATCCCGGCCTGTTCTTCCAGATCTCGTCGGTGATCACCCCGGCACCATGTTCCTGA
PROTEIN sequence
Length: 170
MASAAEQLASNLNFAAFAKAEDLKKRIWFTLGALFVYRLGTYIPLPGINPEAFAQAFQQQSGGVLGMFNMFAGGAVERMAIFALGIMPYISASIIMQLMTSVIPTLEALKKEGEQGRKIINQYTRYGTVLLAIVQSYGISVGLSSGNNIVTNPGLFFQISSVITPAPCS*