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SCNpilot_expt_1000_bf_scaffold_3183_24

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(18297..18656)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: 50S ribosomal protein L18, cyanelle-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14CB4 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 119.0
  • Bit_score: 198
  • Evalue 3.80e-48
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 119.0
  • Bit_score: 196
  • Evalue 2.00e-47
ribosomal protein L18, bacterial type similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 119.0
  • Bit_score: 190
  • Evalue 3.30e-46

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCTTTGAAAGAATCTATCCAGCGCCGCTCTGCGCGTATCCGTCGGCATCTGAAGGCGGTTTCCAACGGCAGGCCGCGTCTTTCGGTGCATCGCACCTCGAAGAACATCTACGTCCAGATCATCGACGACGCCAAGGGTCACACCATCGCGGCCGCTTCGACGCTGGAGAAGGATTTCCGCGACGCCAAGAAGACCGGTGCCGACACAGCAGCGGCAGCGGCAGTTGGCAAGCTGATTGCGGACCGCGCCAAGAAGGCCGGCGTCAAGCAGGTCGTTTTCGATCGTGGTTCATACATCTACCACGGCCGCGTCAAGGCTCTTGCCGAGGCGGCGCGTGAGGGTGGCCTCGAATTCTGA
PROTEIN sequence
Length: 120
MALKESIQRRSARIRRHLKAVSNGRPRLSVHRTSKNIYVQIIDDAKGHTIAAASTLEKDFRDAKKTGADTAAAAAVGKLIADRAKKAGVKQVVFDRGSYIYHGRVKALAEAAREGGLEF*