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SCNpilot_expt_1000_bf_scaffold_3183_25

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(18749..19282)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: 50S ribosomal protein L6, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11566 similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 177.0
  • Bit_score: 329
  • Evalue 1.60e-87
  • rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 177.0
  • Bit_score: 326
  • Evalue 2.50e-86
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 177.0
  • Bit_score: 323
  • Evalue 4.80e-86

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Taxonomy

Mesorhizobium sp. LNJC372A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCTCGTATTGGAAAGAAGCCCGTATCCGTGCCGCAGGGCGTGACCGCTTCGGTCGACGGTCAGACCGTCACGGCCAAGGGTCCGAAAGGTGAACTGAAGTTCGTCGTCAACGACGAGGTTCTGGTCAAGCTGGAGAACGGCGAAATCGCCGTGCAGCCGCGCGACACCTCGAAGGGGGCTCGCTCGAAGTGGGGCATGTCCCGCACGCAGATCGTCAACATCCTGACCGGCGTGAAGGACGGCTTTGAAAAGAAGCTCGAGATCACCGGCGTTGGCTATCGTGCCGCGATGCAGGGCCAGAACCTGCAGCTTGCGCTTGGCTTCAGCCACGATGTCGTATACCAGACGCCGAAAGGCATCACGATCACTGTTCCGAAGCCGACCGAAATCAGCGTGACCGGCATCGACAAGCAGCAGGTCGGCCAGGTTGCGGCAGAGATCCGTGAGTATCGCGGTCCTGAACCTTACAAGGGCAAGGGCGTGCGCTACGCCGGTGAGAAGATCCTTCGCAAGGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRIGKKPVSVPQGVTASVDGQTVTAKGPKGELKFVVNDEVLVKLENGEIAVQPRDTSKGARSKWGMSRTQIVNILTGVKDGFEKKLEITGVGYRAAMQGQNLQLALGFSHDVVYQTPKGITITVPKPTEISVTGIDKQQVGQVAAEIREYRGPEPYKGKGVRYAGEKILRKEGKKK*