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SCNpilot_expt_1000_bf_scaffold_5288_18

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(10729..12045)

Top 3 Functional Annotations

Value Algorithm Source
Xylose transport permease protein xylH n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDY8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 443.0
  • Bit_score: 742
  • Evalue 2.00e-211
  • rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:EXL06650.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 438.0
  • Bit_score: 771
  • Evalue 5.60e-220
inner-membrane translocator; K10544 D-xylose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 438.0
  • Bit_score: 741
  • Evalue 1.40e-211
  • rbh

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGAGTGACGCGACCTCTGCAACGACGGTCGACCGGGCGCGCGAGGCTGAACTCGGCCCCGTCGCCCGCTTCCTGAAAGCGACAGAACTCGACACCCGCATGCTGGGCATGGTCGCGGCGCTGATCCTGATCTGGATCGTGCTGCACTTCCTGTCCGGCGGGTTGTTCCTGACACCACGCAACCTGTGGAACCTGTCGGTCCAGACCTCGTCGGTCGCGATCATGGCGACCGGCATGGTGCTGGTCATCGTCATGCGCAACATCGATCTGTCGGTGGGTTCGCTCGAAGGCGTCATCGGCATGATCATGGGCGTGCTTCAGGCCCAGATACTCATTCGCGTCGTCGGATTTCCAGCCGGAGACCCGTGGATATGGATCATCGCGCTTGCCTGCGGCATAGCCTTCGGCCTGCTGATCGGGGCGTTCCAGGGCTTCATCATCGCCTATCTGGAAGTGCCGTCCTTTATCGTTACGCTCGGCGGCCTTTTGGTCTGGCGCGGCGCGGCATGGTGGGTGACCAGCGGCCAGACGGTCGCGCCGCTCGATGCAACGTTCCAACTCATGGGCGGTGGTCCAAACGGTTCCATCGGCGCGACGTGGAGTTGGATCATCGGCATTGTCGCATGTCTGGCGGTGATCTTCATGCTGCTCAATGGACGCACACAGCGCAAGCGCTTCCGCTTCCCGCTGCGGCCGGTCTGGGCCGAGGTGTTTCTCGGCGCTGTTGCCTGCGCCGTCATTTTGGGCGCCATACAGGTCGCTAATTCCTATCCGTGGCCGGTCGGCATCGTGAAGCGCTATGCGGAAGCGAACGGTATAACCATTCCCGAAGGTGGGCTGTTCATTGCCCACGGCATTGCCATTCCTGTTTTGATGGCGGTTACGGTCGGCATCGTCATGACCTTCGTTACCAACCGGACGCGCTTCGGACGCTACGTTTTCGCCATCGGCGGCAACCCTGAGGCGGCCAACCTTGCCGGTATCAACACCCGCTGGGTGACGATGAAGGTGTTCATGATCATGGGTGCGCTGGTGGCGATCAGCGCAGCGATCTCGTCGGCTCGCCTCAACGCTTCCACCAATGCGCTCGGCACGCTGGACGAACTTCTGGTCATCGCGGCGGCGGTTATCGGCGGCACGTCGCTTGCCGGCGGCGCAGGCACCGTTGTCGGCGCCATGCTGGGCGCGCTTTTGATGCAGTCGCTGCAGTCCGGCATGGTGCTGCTCGGCGTCGATTCACCATTGCAGAGCATCGTCGTCGGTGCGGTTCTGGTCGTCGCGGTGTGGCTCGACACCGTCTATCGCAAGCGGGTTTAG
PROTEIN sequence
Length: 439
MSDATSATTVDRAREAELGPVARFLKATELDTRMLGMVAALILIWIVLHFLSGGLFLTPRNLWNLSVQTSSVAIMATGMVLVIVMRNIDLSVGSLEGVIGMIMGVLQAQILIRVVGFPAGDPWIWIIALACGIAFGLLIGAFQGFIIAYLEVPSFIVTLGGLLVWRGAAWWVTSGQTVAPLDATFQLMGGGPNGSIGATWSWIIGIVACLAVIFMLLNGRTQRKRFRFPLRPVWAEVFLGAVACAVILGAIQVANSYPWPVGIVKRYAEANGITIPEGGLFIAHGIAIPVLMAVTVGIVMTFVTNRTRFGRYVFAIGGNPEAANLAGINTRWVTMKVFMIMGALVAISAAISSARLNASTNALGTLDELLVIAAAVIGGTSLAGGAGTVVGAMLGALLMQSLQSGMVLLGVDSPLQSIVVGAVLVVAVWLDTVYRKRV*