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SCNpilot_expt_1000_bf_scaffold_5288_19

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(12364..13404)

Top 3 Functional Annotations

Value Algorithm Source
D-xylose transporter subunit periplasmic-binding component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F478_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 346.0
  • Bit_score: 636
  • Evalue 2.10e-179
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXL06651.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 346.0
  • Bit_score: 637
  • Evalue 1.30e-179
D-xylose ABC transporter periplasmic substrate-binding protein; K10543 D-xylose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 346.0
  • Bit_score: 633
  • Evalue 4.20e-179

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGAGGAAATTTACGGCCGCCATCCTGGCGGGTGCCGCTATGTCGCTGACGCTTGTCGCGACCGCCGAGGCAAAGGACAAGGTCATCGGCGTCTCCTGGTCGAACTTCCAGGAAGAGCGTTGGAAGACAGACGAGGCTGCCATGAAGGCGGCAATCGAGGCTGCCGGCGACAAGTACATCTCCGCTGACGCGCAATCATCCGCGGCCAAGCAGCTTACCGACGTCGAAAGCCTCATCAGCCAGGGCGCCAATGCGCTGATCATTCTGGCGCAGGACGCTTCGGCCATCGGCCCGGCAGTTCAGAAGGCGCTGGACGAGAGCATTCCGGTTGTCGGCTATGACCGCCTGATCGAGAACAAGGACGTCTTCTATCTCACCTTCGACAACAAGGAAGTGGGCCGCATGCAGGCTCGCGAAGTGTTCAAGGTGAAGCCGGAAGGCAACTACGTCTTCATCAAGGGCTCGGGCGCCGATCCGAACGCCGACTTCCTGTTCGCAGGTTCGATGGAAGTGCTCAAGGAAGCCATCGACAGCGGCAAGATCAAGAATGTCGGCGAGGCCTATACCGATGGCTGGCTGCCGGCCAACGCCCAGAAGAACATGGAGCAGTTCCTGACCGCCAACGACAACAAGGTCGATGCGGTTGTGGCGGCCAATGACGGCACCGCCGGTGGCGTTGTCGCAGCACTGACGGCGCAGGGTCTTGCAGGCAGTGTTCCGGTCTCGGGCCAGGACGGCGACCATGCCGCCCTGAATCGCGTGGCGCTGGGTACCCAGACCGTTTCGGTGTGGAAGGATGCACGTGAGCTCGGCAAGAACGCCGCCGAGATCGCTTCGCAGCTTGCCGATGGCAAGGCCATGACCGACATCGCCAATGTGCAGGACTTCACCACGCCCGGCGGCAACACCGTCAAGTCGGTGTTCCTGACCCCGATCGCGATCACCAAGGACAATCTCAACGTCGTCATCGACGCCGGCTGGATTTCCAAGGATGCGGTTTGCGCCGGCGTCGCCGCTGGTGCGGTTGCCGCCTGCAACTAA
PROTEIN sequence
Length: 347
MRKFTAAILAGAAMSLTLVATAEAKDKVIGVSWSNFQEERWKTDEAAMKAAIEAAGDKYISADAQSSAAKQLTDVESLISQGANALIILAQDASAIGPAVQKALDESIPVVGYDRLIENKDVFYLTFDNKEVGRMQAREVFKVKPEGNYVFIKGSGADPNADFLFAGSMEVLKEAIDSGKIKNVGEAYTDGWLPANAQKNMEQFLTANDNKVDAVVAANDGTAGGVVAALTAQGLAGSVPVSGQDGDHAALNRVALGTQTVSVWKDARELGKNAAEIASQLADGKAMTDIANVQDFTTPGGNTVKSVFLTPIAITKDNLNVVIDAGWISKDAVCAGVAAGAVAACN*