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SCNpilot_expt_1000_bf_scaffold_5288_20

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 13642..14481

Top 3 Functional Annotations

Value Algorithm Source
ROK family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDP1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 248.0
  • Bit_score: 400
  • Evalue 1.20e-108
ROK family transcriptional regulator {ECO:0000313|EMBL:ESX68745.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 248.0
  • Bit_score: 400
  • Evalue 1.70e-108
ROK family protein similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 248.0
  • Bit_score: 386
  • Evalue 5.50e-105

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGACGGTTGGAATCCGCCACGACGATTTGCGACGGCGCAACCGCGCCATGGTCATCTCGGCCGTGCGGCGCAATGGCCAGACCTCGCGCACCGAAATCGCCGCGGTCACCGGCCTCAGCCACTCCACCATATCGGCCATCTCGTCCGACCTGATTGCCGAAGGCATTCTGGCCGAGGCCCGCCATGAACAGCTTGCCCTCAAGCGCGGCAGGCCGCAAGTCGCGCTGGCGCTCGAGCCGAAGGCAGCGGTGGTGATGACGGTCGTTCTGTCGCTCAATTTCCTCGCCGCCACCCTGCTTGACTATGCCGGCGAAATCGTCGCCGAAGAACAGCATCGGCTCGACACCCGCGCCATGCCGCGCGAAGAGCTCATCAGCGAATGCGTGGCAATCATCCGGCGCAAGCTGGACGATCCGAGACGCGACGGACGCCGCGTGCTGCGCATCGTTTTGGCCATACAGGGCATCACCGATGCGCCGGCGCGCGCCATGCTCTGGTCGCCGATCACACCGCACACCGACATCGCCTTTGCCGACATACTGGAACGCGAATTCTCCGTGCCCGTCACGGTCGAGAACGACTGCAACATGATGGCGGTGGCGCTGCGCTGGCGCGACCCGGAGCGCTACCGCAACGACTTCATCGCCATCCTGTTGTCGCACGGCATCGGCATGGGGCTGGTGCTGAAGGGCGAACTCTTTACCGGCACGCATTCGTCCGGCGGCGAGTTCGGCCACATGAGGCGCGCTGTGCCGCTGCGGTCGGCGCGGCTGCATCGAGGCCTATGCCGGCAACTACGCCATCTGGCGCAATGCGCGGCGCATGGACGAGAACGCTGA
PROTEIN sequence
Length: 280
MTVGIRHDDLRRRNRAMVISAVRRNGQTSRTEIAAVTGLSHSTISAISSDLIAEGILAEARHEQLALKRGRPQVALALEPKAAVVMTVVLSLNFLAATLLDYAGEIVAEEQHRLDTRAMPREELISECVAIIRRKLDDPRRDGRRVLRIVLAIQGITDAPARAMLWSPITPHTDIAFADILEREFSVPVTVENDCNMMAVALRWRDPERYRNDFIAILLSHGIGMGLVLKGELFTGTHSSGGEFGHMRRAVPLRSARLHRGLCRQLRHLAQCAAHGRER*