ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5288_21

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 14465..14875

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFC7EF related cluster n=1 Tax=unknown RepID=UPI0003CFC7EF similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 136.0
  • Bit_score: 198
  • Evalue 4.30e-48
ROK family transcriptional regulator {ECO:0000313|EMBL:EZQ14475.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 133.0
  • Bit_score: 200
  • Evalue 2.10e-48
xyl repressor similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 136.0
  • Bit_score: 198
  • Evalue 1.80e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGGACGAGAACGCTGAGCCGGTGGACGACATCGGCGAGGCCGACATGCGCGCCTTGGCGGACGCGGCTAGGGATCATGACGGGCCGGAACGGGAAGCCTATCGCAAGGCCGGCGAAGCGCTGGGCTTCGGCCTCGGCAGCCTGTTTGCGCTCATCGACCCGGCTCCGGTGGCGATGGTCGGGGCAAGTGCTGCCGCCTTCGACCTCATAGAGCCGTCGCTGCGCGAAGCCATCGCGCGGACGGCCGGCGGCCACCACTCGACCTCGATATCGTTCGACACCGAACCGGATGAGCTGGCGCTTTTGCGCGGCGGCTGCGCCATGCGCGCGCTCACCTTCGTCGACAACGAGATTTTCGCCGCCGGCAACCCGGCCCAGATGGAACTCGCCGCCGGGCACGAAATGGCGTAA
PROTEIN sequence
Length: 137
MDENAEPVDDIGEADMRALADAARDHDGPEREAYRKAGEALGFGLGSLFALIDPAPVAMVGASAAAFDLIEPSLREAIARTAGGHHSTSISFDTEPDELALLRGGCAMRALTFVDNEIFAAGNPAQMELAAGHEMA*