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SCNpilot_expt_1000_bf_scaffold_1745_1

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 37 / 55 MC: 1 BSCG 41 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 3..317

Top 3 Functional Annotations

Value Algorithm Source
type II secretory pathway component PulF; K12278 MSHA biogenesis protein MshG id=12495068 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 105.0
  • Bit_score: 198
  • Evalue 3.30e-48
type II secretory pathway component PulF; K12278 MSHA biogenesis protein MshG similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 104.0
  • Bit_score: 182
  • Evalue 6.00e-44
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 105.0
  • Bit_score: 197
  • Evalue 8.00e-48

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
TGGATCGCCTCGCGCGTCGAGCAGATGCGCAACGGCATCGAGCGCGGCGAATCGGTCCTGCGCACCGCGCAGAACGCAGCCGTGTTCAACCCGGTGGTGCTGCAGATGATCGCCGTCGGCGAGGAAACCGGCAGCATCGATGAGCTCATGCAGGAAGTCTCCGGGATGTACGAACGCGAGGTGGACTATGAAATCAAGACCCTGGCCGCCCGTATCGAACCGCTGATCATCGTCGCCCTGGGCGGCGTCGTGCTGGTGCTGGCACTCGGCGTGTTCCTGCCGATGTGGGACCTCGCCAGCGTCGCCATCAAGTGA
PROTEIN sequence
Length: 105
WIASRVEQMRNGIERGESVLRTAQNAAVFNPVVLQMIAVGEETGSIDELMQEVSGMYEREVDYEIKTLAARIEPLIIVALGGVVLVLALGVFLPMWDLASVAIK*