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SCNpilot_expt_1000_bf_scaffold_1745_2

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 37 / 55 MC: 1 BSCG 41 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 440..1006

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway, pseudopilin PulG id=1372871 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 192.0
  • Bit_score: 235
  • Evalue 4.40e-59
type II secretory pathway, pseudopilin PulG; K10924 MSHA pilin protein MshA similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 195.0
  • Bit_score: 227
  • Evalue 3.80e-57
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 192.0
  • Bit_score: 235
  • Evalue 6.20e-59

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGCACACCCTGAAGGACATGAAAACCAGGCAGCGCGGCTTCACCATGATCGAACTCATCGTCGTCATCGTCATCCTCGGCATCCTCGCCGCGGTGGCGCTGCCGCGCTTCACCAACATCCAGCGCGATGCCCGGATTGCCAAGCTGAATGCGGCGCGGGGCGCGGTGTTGGCGGCGTCGGGAATGATTCATGGCGCGGCTCTGGTGCGCGGCGGCGTGGCTGATACAGCCAATTGCCCAGTGAACTTGGGGCCAGCCCCCAACCGCGCTGACAACACGACCAACCTGTGTACTGAATCGGGGCGTGTCGCGATCGTTAACGCGTACCCTGCGGCCACGTGGGACGGAATTGTGAATGCGGCGGGACTCACCTCCACCTTCGCCAACACCTCGGCGGCTTTGGACGCTGCGCTTACAGCTGATGGTTATGCGCAGGTGGCATCGGGCGCGAACATCCGGATTCAGGTGCTCGGTGGCAGCAACCCGGCCAACTGCCGCTTCCAATACAATCCGGCGGCTGCCAACGGCGCACCGGTAATCAGTGCAATTACCACAACTGGCTGTTGA
PROTEIN sequence
Length: 189
MHTLKDMKTRQRGFTMIELIVVIVILGILAAVALPRFTNIQRDARIAKLNAARGAVLAASGMIHGAALVRGGVADTANCPVNLGPAPNRADNTTNLCTESGRVAIVNAYPAATWDGIVNAAGLTSTFANTSAALDAALTADGYAQVASGANIRIQVLGGSNPANCRFQYNPAAANGAPVISAITTTGC*