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SCNpilot_expt_1000_bf_scaffold_5943_5

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 37 / 55 MC: 1 BSCG 41 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 4679..5458

Top 3 Functional Annotations

Value Algorithm Source
truA, hisT; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 259.0
  • Bit_score: 449
  • Evalue 8.40e-124
tRNA pseudouridine synthase A n=1 Tax=Thiobacillus thioparus RepID=UPI0003609AA0 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 259.0
  • Bit_score: 514
  • Evalue 6.80e-143
  • rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 260.0
  • Bit_score: 508
  • Evalue 5.20e-141

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGCGTATCGTATTGGGTCTGGAATATTGCGGCATCGGCTTTTGCGGCTGGCAGTCGCAGCCGCAGGGGTGTGGCGTGCAGGACGCACTGGAAGCGGCCGTGTCGGCGATTGCCGGCGAAAAGACCATCGTCACCGCGGCCGGACGTACCGATACCGGCGTGCATGCGGCATTCCAGGTCGCACATTTCGACACGCCGGCCCAGCGCCCGCTTACGGCCTGGGTGCGTGGCGTCAATAGTCATCTTCCGTCCGGCGTGGCGGTGTTGTGGGCACGCGAGGTGGGCGGAGATTTCCATGCGCGTTTCGCCGCCACACAGCGGGGCTACCGCTATGTGCTGCTGAATCACCCGGTGCGGCCCGGTCTCAATCACGGGCTGATCGGCTGGCATCATCGTCCGCTCGACGCTGACGCGATGAACCGGGCGACGACGCACCTGATCGGTCGGCACGATTTTTCCGCTTTTCGTGCCGCCGAGTGCCAGGCCAAGTCGCCGGTCAAGGAACTGCGGCTGGCGCAGATCGAGCGGCGCGGCGATTTTCTGTTGTGTGATTTCCGTGCCGACGGTTTCCTGCACCACATGGTGCGCAACCTCATGGGCTGCCTGGTTCATATCGGTGTCGGCATGCAGTCGCCCGAATGGATGGGCGAGATTCTGCAAAGCCGCGACCGCACGCTGGCAGCGCCCACTTTCGACGCCGCCGGACTGTACCTGACCCACATCCGGTATCCTGCGCACTTTGCTTTGCCGGAAAGCTCTGAACGATGGCCGTTCGCGTAA
PROTEIN sequence
Length: 260
MRIVLGLEYCGIGFCGWQSQPQGCGVQDALEAAVSAIAGEKTIVTAAGRTDTGVHAAFQVAHFDTPAQRPLTAWVRGVNSHLPSGVAVLWAREVGGDFHARFAATQRGYRYVLLNHPVRPGLNHGLIGWHHRPLDADAMNRATTHLIGRHDFSAFRAAECQAKSPVKELRLAQIERRGDFLLCDFRADGFLHHMVRNLMGCLVHIGVGMQSPEWMGEILQSRDRTLAAPTFDAAGLYLTHIRYPAHFALPESSERWPFA*