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SCNpilot_expt_1000_bf_scaffold_14147_2

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 37 / 55 MC: 1 BSCG 41 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(293..1018)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Thiobacillus thioparus RepID=UPI00036658E7 similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 227.0
  • Bit_score: 439
  • Evalue 2.60e-120
  • rbh
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 198.0
  • Bit_score: 372
  • Evalue 9.30e-101
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 242.0
  • Bit_score: 444
  • Evalue 1.10e-121

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGATAGCAGGCTTGGGCCGTGTCCGAATAACCCTGTTTAGGGTGAACTTTTTTACCCTGACCCGCTCACATGTTCCGGAAGGTGCGGTCACGTATACTTTCAACACAAACAAGAAGCAGCAGGGAGATATGTCGGACCGCGAACTGGATCAGGTGTTGGTCGAACGCGCCCAGCAGGGCGACAAGCGCGCTTTCGAGCTGTTGGTGAGCAAGTATCACCGCAAGCTCGGGCGGCTGTTGTCGCGCATGGTGCGGGATGCTGCGGAGGTGGAAGATATTACGCAGGAAGCTTTTATCAAGGCCTACCGTGCGTTGCCGGGGTTTCGTGGTGAGAGCGCCTTCTACACCTGGCTGTATCGTATCGCCGTGAATACCGCCAAGAATTATCTGGTGGCGCACAAGCGCATGCCGGTGGCGAGCGACGTGCAGGCGGAAGATGCGGAGAATTACGAGGACGGCGACCTGTTGCGCGATATTGCGACGCCGGAAGCGGAACTCCAGACCAAACAGATCGCCAAAGCAGTCAATGAGGCGGTCGATGCGCTGCCCGAGGAATTGAGGACGGCCATCACGCTGCGCGAGATCGAAGGCATGAGCTACGAGGAAATCGCGCAAATGATGGACTGCCCGATCGGTACTGTGCGCTCGCGGATTTTCCGCGCGCGCGAGGCCATAGCGGAAAAGATACGCCCGATGCTGGGCACCAGTCAGGACAAAAGGTGGTAA
PROTEIN sequence
Length: 242
MIAGLGRVRITLFRVNFFTLTRSHVPEGAVTYTFNTNKKQQGDMSDRELDQVLVERAQQGDKRAFELLVSKYHRKLGRLLSRMVRDAAEVEDITQEAFIKAYRALPGFRGESAFYTWLYRIAVNTAKNYLVAHKRMPVASDVQAEDAENYEDGDLLRDIATPEAELQTKQIAKAVNEAVDALPEELRTAITLREIEGMSYEEIAQMMDCPIGTVRSRIFRAREAIAEKIRPMLGTSQDKRW*