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SCNpilot_expt_1000_bf_scaffold_2773_12

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(10780..11991)

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhodanobacter denitrificans RepID=M4ND04_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 397.0
  • Bit_score: 645
  • Evalue 3.00e-182
penicillin-binding protein, beta-lactamase class C similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 397.0
  • Bit_score: 645
  • Evalue 9.60e-183
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AGG88549.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 397.0
  • Bit_score: 645
  • Evalue 4.30e-182

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGGTCCAGCGATTCGGGTCCGTGCGTGCGCTGTCGTTCCGGCTGTTGGCCGGCCATGCCTTGCTGGTGCTCGGCGCGTCGGCGCTGGCGCAGGCTCCGGCCACGCAGCAGCTGCCGCCGCCGGTATCGACCGGCGACATCGTGCAGCCGCTGCTGCCGGCGCAGCTGCAGGATTTCGACGCCTACATGGCGGATACGCTGAAGACCTTCGAGGTGCCCGGCATCGCGGTGGCCATCGTCAAGAACGGCAAGGTGGTGATGGAGCGCGGCTTCGGCGTGAAGGAGCTGGGCAAGCCGGACCCGGTCGACGCCCACACGCTGTTCGCGATCGCCTCCAACACCAAGGCCTTCACTGCCGCGGCGCTGCAGCAGCTGGCCGACGCGGGCAAGCTGGACATGGACGACCGCGTGATCGACCACCTGCCCTGGTTCCGCATGTCCGATCCGTACGTGACGCACGAGATGCGCATTCGCGACCTGCTGGCGCACCGCAGTGGCCTGAGTCTGGGCGCGGGTGATCTGCTGTACTGGCCGCCGTCCTCGTACACCACCAGGGAAGTGGTCGAGCGGTTGGCCAAGGTGCCGCTGAAGAACGGTTTCCGCAGCCACTACGCCTACGACAACATCCTGTTCGCGGTGGCCACCCTGGTGATCGAACAGGCTTCCGGCCAGAGCTATGCCGACTACGTGCGCGAGCACCTGTTCAAGCCGGTGGGCATGGAGGAGTCGCTGATCGACATGACTTACCTGAAGCCCGGCATGGACGTGGCTGCCGGTCATGCCCCGTACGAGTTCAAGGACATCAAGCCGGTGCCGCCGATGGCCTGGCTCAATGATCCGGGCGCTGGCGGCATCTACTCCAGCGTGCATGACCTGGCCAAGTGGATGAACGTGCAACTGGCCGGCGGCGCCTTGCCGACCGTGGGCGCCGACGGCAAGCCGCGGCGGGTGTTCTCCGAGAAGAGCCACCACGAGATGTGGTCGATGCTGACGCCGATACCGATCAGGAAGGCGTCGATCCCCGAGCTGGAGCCGCTGACACCGGACTACTACGGCTATGGCGAAGGCTGGTTCCTCGGCCAATACCAGGGCCGCAAGCTGGTCTGGCATACCGGCGGCTGGCCCGGTTTCGTCTCGCGCGTGACGATGGTGCCCTCGTTGAAGCTCGGCGTGGTAGTGCTGACCAACCAGCAGTCCGGCGCCGCGTTGTGA
PROTEIN sequence
Length: 404
MVQRFGSVRALSFRLLAGHALLVLGASALAQAPATQQLPPPVSTGDIVQPLLPAQLQDFDAYMADTLKTFEVPGIAVAIVKNGKVVMERGFGVKELGKPDPVDAHTLFAIASNTKAFTAAALQQLADAGKLDMDDRVIDHLPWFRMSDPYVTHEMRIRDLLAHRSGLSLGAGDLLYWPPSSYTTREVVERLAKVPLKNGFRSHYAYDNILFAVATLVIEQASGQSYADYVREHLFKPVGMEESLIDMTYLKPGMDVAAGHAPYEFKDIKPVPPMAWLNDPGAGGIYSSVHDLAKWMNVQLAGGALPTVGADGKPRRVFSEKSHHEMWSMLTPIPIRKASIPELEPLTPDYYGYGEGWFLGQYQGRKLVWHTGGWPGFVSRVTMVPSLKLGVVVLTNQQSGAAL*