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SCNpilot_expt_1000_bf_scaffold_2773_15

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(13782..15335)

Top 3 Functional Annotations

Value Algorithm Source
TGF-beta receptor type I/II extracellular region n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRI5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 515.0
  • Bit_score: 993
  • Evalue 9.90e-287
  • rbh
TGF-beta receptor type I/II extracellular region {ECO:0000313|EMBL:EIM02077.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 515.0
  • Bit_score: 993
  • Evalue 1.40e-286
amino acid/peptide transporter (peptide:H symporter) similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 515.0
  • Bit_score: 951
  • Evalue 1.00e-274
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
ATGAGCACCACCTCCGACCATGATCGCGGCCGCTTGCCGCGCCAGATCGCCTACATCATCGGCAACGAGGGTTGCGAGCGTTTCTCGTTCTACGGGATGCGCAACATCCTCACTCCGTTCCTGATCACGAGCTTGCTGCTGTACCTGCCCGAGGGCCAGCGCATGCTGGCGGCGAAGGACGTGTTCCACACCTTCGTGATCGGCGTGTATTTCTTCCCGCTGTTGGGCGGCTGGATCAGCGACCGTTTCTTCGGCAAGTACAACACCGTGTTGTGGATGAGCCTCGTCTATTGCGCCGGTCACGCCTGCCTGGCGATCTTCGAGGACAACCGGCTGGGCTTTTTCGCGGGACTGGGCCTGATCGCGCTGGGCGCGGGCGGCATCAAGCCGCTGGTGGCGTCGTTCGTGGGCGACCAGTTCGACCAGTCGAACAAGCACCTGGCGAAGATGGTGTTCGACGCGTTCTACTGGATCATCAACTTCGGCTCGTTCTTCGCCTCGCTGCTGATGCCGCTGTTCCTGCACCACTTCGGCGCGGCGGTGGCGTTCGGCATTCCCGGGGGCTTGATGTTCGTCGCCACCGTGGTGTTCTGGCTGGGCCGCAAGCAGTACGTGATGGTGCCGCCGGGGCCGCCGGACCAGCATGCGTTTTCGCGGGTGGTCCGTACCGCGCTGCTGACGCAGCGGCCGGGTCAGACGCGGCCGGGCTTGTGGCTGGCGGTGGTCGCGGTGGTGGTGGCGCTGGCGTCGTTCGCGCTGGTGCCGTCGCTCGGCTTCGTGATCGCCGCATGCATCGCGCTGGTGGTGCTGATCGGCGGCGTGGGCGGCGGCGCCTGGCTGCAGATGGATCGCGCACGGGGCGCGCATCCGGACGCTGCGGTCGATGGCGCACGCAACGTGCTGCGCGTGCTGGTGATCTTCGCGCTGACCACGCCGTTCTTCTCGCTGTTCGACCAGAAGGCCTCGACCTGGGTGATCCAGGGTGGCGAGATGACGATGCCGTCCTGGTTCCGGCCGGCGCAGATGCAGGCGCTGAACCCGTTGCTGGTGATGCTGCTGATCCCGTTCAACAACCTGGTGCTGTACCCGCTGTTGCGCCGGCTCGGCTACGAGCCCACCGCGCTGCGCCGGATGACCGCCGGCATCGCGTTCAGCGGCCTGGCCTGGATCGTGGTGGGCGGCCTGCAGGTGGTGATCGACGGCGGCGATCCGCTGTCGATCGTGTGGCAGGTATTGCCGTACGCGCTGCTCACCTTCGGCGAGGTGCTGGTCTCCGCGACTGGTCTGGAGTTCGCCTACAGCCAGGCGCCGGCCTCGATGAAGGGCGTGGTGATGAGTTTCTGGAATCTCACCACCACGGTCGGCAACCTGTGGGTGCTGCTGGCCAACGCGGCGGTGCGCAACGAAAGCGTGATCGGTTCGATCGCCCACAGCGGGCTCAGCGTCACGGCGTTCCAGATGTTCTTCTTCGCCGCTTTCGCCTTGCTCGCTGCGCTGGCGTTCGGGCTGTACGCGAGGCGCTATCGCGAAGTGGATCACTACCGGCCGGTGTAG
PROTEIN sequence
Length: 518
MSTTSDHDRGRLPRQIAYIIGNEGCERFSFYGMRNILTPFLITSLLLYLPEGQRMLAAKDVFHTFVIGVYFFPLLGGWISDRFFGKYNTVLWMSLVYCAGHACLAIFEDNRLGFFAGLGLIALGAGGIKPLVASFVGDQFDQSNKHLAKMVFDAFYWIINFGSFFASLLMPLFLHHFGAAVAFGIPGGLMFVATVVFWLGRKQYVMVPPGPPDQHAFSRVVRTALLTQRPGQTRPGLWLAVVAVVVALASFALVPSLGFVIAACIALVVLIGGVGGGAWLQMDRARGAHPDAAVDGARNVLRVLVIFALTTPFFSLFDQKASTWVIQGGEMTMPSWFRPAQMQALNPLLVMLLIPFNNLVLYPLLRRLGYEPTALRRMTAGIAFSGLAWIVVGGLQVVIDGGDPLSIVWQVLPYALLTFGEVLVSATGLEFAYSQAPASMKGVVMSFWNLTTTVGNLWVLLANAAVRNESVIGSIAHSGLSVTAFQMFFFAAFALLAALAFGLYARRYREVDHYRPV*