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SCNpilot_expt_1000_bf_scaffold_4217_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 4844..6235

Top 3 Functional Annotations

Value Algorithm Source
Protease Do n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFS5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 459.0
  • Bit_score: 744
  • Evalue 5.50e-212
  • rbh
Protease Do {ECO:0000313|EMBL:EIL98316.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 459.0
  • Bit_score: 744
  • Evalue 7.70e-212
periplasmic serine protease, Do/DeqQ family similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 467.0
  • Bit_score: 743
  • Evalue 3.00e-212
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGTCGCCTCGCCATCCCTCCGTGCCGTCGTGGTTGACCGGCTTGCTGGCCGCGCTGGTGATCGCGTTCGGCACGCTGCCGGGCGCCGGCCGCGCCGCCACCTTGCCGGCGGCGATCGACGGCCAGCCGATGCCGTCGCTGGCGCCGATGCTGACCCGGGTGACGCCGGCGGTGGTGAACATTTCCAGCACCACCCACGTGCCGGTGCGCGATGCGTATTTCGACGATCCGATGGTGCGCCAGTTCTTCGGCCTGCCGCCCACGCCACGCGAGCGCGTGGAGCAGAGTCTGGGTTCGGGCGTGATCGTGGACGCCGCCAGGGGCTACATCCTGACCAACAACCATGTGGTCGCCGGCGCCGACGACATCAGCGTGACGCTGCAGGACGGGCGCAGCTTCAAGGGCAAGCTGATCGGCACCGACCCGGCCACCGACGTGGCGGTGGTGCAGATCCGGGCCAGCGACCTGCACGCGCTGCCGATGGCCGACTCCTCCACCCTGCGCGTGGGCGACTACGTGGTGGCGGTGGGCGAACCGTTCGGCCTGGGCCAGACGGTGACCGCCGGCATCGTCTCGGCGCTGGGGCGCTCGGGCCTGGGCGATTCGAGCTACCAGAACTTCATCCAGACCGACGCCTCGATCAACCCGGGCAACTCCGGCGGCCCGCTGGTGAACCTGCGCGGCGAGCTGGTCGGCATCAACACGATGATCTTCTCGCCCTCGGGCGGCAACGTGGGCATCGGCTTCGCGATCCCCAGCAACCTCACCGCCGAGGTGATGAAGCAGCTGATCGCGCATGGCAAGGTCGAGCGCGGCAGCCTGGGCCTGCAGGCGCAGGCGATCACCCCGCGCATCGCCCAGGCGCTGGGGCTGAAGGAGAGCAAGGGCGTGGTGGTGACCGGCGTCGGCGACGGTTCGGCCGCCGCGCGCGCCGGGCTGCAGCCGGGCGACGTGCTGACCTCGCTCAACGGCAAGCCGCTGCAGAGCGTGCAGCAGCTGCGCAACACCGAAGGCCTGCTGCCGCTGGGCAGCAGCCTGCAACTGGGCATCGTGCGCGACGGCCAGCCGCGCCAGGTCAATGCGACGCTGAGCGCCGAGAAGCTGGCCAGCCTCGACGGCGGCCAGCTCGACCCGCGCCTGGCCGGCGTGCGTTTCAGCGAGCTGAGCCAGAGCCAGCGCGACCAGGGTTGGTACGGCGCCGCCGTCAGCACGGTGCAGCCGGGCAGCCGCGCCGCCCAGGCGGGACTGCGTGCGGGCGACGTGGTGGTCGGCATCGGCAACCAGCGCCTCACCAGCCTGCGCATGCTGCGCGGGCTGGCCGGCGTGCGCCTGCGCCAGTTGGTGCTGGTGGTGGCCGATACAGACGGCAGCCACTACGTACTGATCAACTGA
PROTEIN sequence
Length: 464
MSPRHPSVPSWLTGLLAALVIAFGTLPGAGRAATLPAAIDGQPMPSLAPMLTRVTPAVVNISSTTHVPVRDAYFDDPMVRQFFGLPPTPRERVEQSLGSGVIVDAARGYILTNNHVVAGADDISVTLQDGRSFKGKLIGTDPATDVAVVQIRASDLHALPMADSSTLRVGDYVVAVGEPFGLGQTVTAGIVSALGRSGLGDSSYQNFIQTDASINPGNSGGPLVNLRGELVGINTMIFSPSGGNVGIGFAIPSNLTAEVMKQLIAHGKVERGSLGLQAQAITPRIAQALGLKESKGVVVTGVGDGSAAARAGLQPGDVLTSLNGKPLQSVQQLRNTEGLLPLGSSLQLGIVRDGQPRQVNATLSAEKLASLDGGQLDPRLAGVRFSELSQSQRDQGWYGAAVSTVQPGSRAAQAGLRAGDVVVGIGNQRLTSLRMLRGLAGVRLRQLVLVVADTDGSHYVLIN*