ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3764_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(744..899)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane two component sensor histidine kinase / response regulator fusion protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUJ6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 50.0
  • Bit_score: 77
  • Evalue 5.50e-12
Na+/proline symporter similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 50.0
  • Bit_score: 77
  • Evalue 1.70e-12
Na+/proline symporter {ECO:0000313|EMBL:AGG87200.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 50.0
  • Bit_score: 77
  • Evalue 7.80e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 156
ATGATCACCGCCGACGGCAGCAGCGAGCTGAAACAGCGCGCCCGCACGCTGGGCTATCCGCTGCTGCACAAGCCGGTGCGCCCGGCGGCGTTGCGGGCGCTGCTGACCGCGTTGGCAGGCAAGCGCGACGGCCGCGAGCGCGCGTCCGTACCATGA
PROTEIN sequence
Length: 52
MITADGSSELKQRARTLGYPLLHKPVRPAALRALLTALAGKRDGRERASVP*