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SCNpilot_expt_1000_bf_scaffold_3560_10

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 6937..7809

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWB1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 275.0
  • Bit_score: 461
  • Evalue 7.60e-127
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EIL91502.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 275.0
  • Bit_score: 461
  • Evalue 1.10e-126
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 283.0
  • Bit_score: 346
  • Evalue 6.60e-93

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGGGCAGTTCGCAACTCAGTTCGCAACGACCACTGACACGGCGCTTGGTACCGCTTGTGTACGCGCTTGTGGGCATGCTGGTGTTGATCTTGGCATTGACCTGGGGGGCGCTGCAGTTGCAGGTCGCTCTCGCCGGTTTCCTCAACGGCGAGAGCGTCTGGTCCAAGGCGCAGAAACAGAGCGTGATTGCGCTCGAAAGTTATGCCATTTCCGGTGATCCGGCCGAACTGACCAGTTACCGGGCGAATTACAGCGTGCTGATGGCGGATCGTTCGGCCCGCGATCAGATCCTTTCCGGCAATTACGACTACGAGGAAGTGGCTGGGGCGCTGCGCCGCAGCGACACGGTCACCATCGCGATACCGGGCGTCATCTTTGTACTGCACCACTTTTCCGGTGCGCCCTACATGCGCGACGCTCTGGACGCCTGGCGCTCCACCGACGCGTCGATTCACGAGTTGAACACGATCGCCGATTCGCTCGCCGCCGGGTACACCAACGGGACGATGACGGCACAGGAAGTCGCCCGTCAACGCGAACGCATCCGCAACATCAACAATTACATCGCACCGCGAAGCGCGGTGTTCTCGCGCCAGATCGCCGATGGAGCGGTGTGGATGGGCCGCGTGTTGTTCTGGAGTGTGCTGGGTGCGGCGCTGATTGCCGCGCTGCTCTGGCTGGGCATGGCCCGCCGCATTCTCGCGAGCGTGCGCGGCACCGAGGAGCGCTACCGCCTGCTGTTCGACAGCGCCGCCGACGCGATCGTGATGATCGACGAAGGCAGCGGACGCATTCTCGACGTGAACCGCACGGCGGCGGCCTGGACCGGGCGCAGCGCGAAGGAGCTGATCGGCGACCGCTACGTGCACCTG
PROTEIN sequence
Length: 291
MGSSQLSSQRPLTRRLVPLVYALVGMLVLILALTWGALQLQVALAGFLNGESVWSKAQKQSVIALESYAISGDPAELTSYRANYSVLMADRSARDQILSGNYDYEEVAGALRRSDTVTIAIPGVIFVLHHFSGAPYMRDALDAWRSTDASIHELNTIADSLAAGYTNGTMTAQEVARQRERIRNINNYIAPRSAVFSRQIADGAVWMGRVLFWSVLGAALIAALLWLGMARRILASVRGTEERYRLLFDSAADAIVMIDEGSGRILDVNRTAAAWTGRSAKELIGDRYVHL