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SCNpilot_expt_1000_bf_scaffold_4717_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(2931..3836)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBS9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 295.0
  • Bit_score: 524
  • Evalue 5.80e-146
  • rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 295.0
  • Bit_score: 524
  • Evalue 8.20e-146
tyrosine recombinase XerC subunit similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 294.0
  • Bit_score: 516
  • Evalue 6.50e-144
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGTCTCCTGAGCCGGTAGTGACCCCGGCCGGCCAAGTCGATGCCTGGCTGGCCCGCCTCGCCGGCGAACGCCACGCCTCGCCGCACACCGTCGCCGGCTATCGGCGCGACCTAGACAAGCTGCTGCGCTTCATGGCGGCAGGTCAGGTAGGCACCTTCGAAGCACTCGACGGCGCGCGCATGCGCGCGTTCATCGCCGGCGAACATCGCGCGGGGCTGGCGCCGAAGAGCCTGCAGCGCCTGCTCTCTTCCTGCCGCAGCCTGTTCCGCCAGCTCGGTCGCGAGGGCACGCTGAGCCACGATCCGCTGCTCGGTGTGCGCGGCCCCAAGGTGCGCCGCAAGCTGCCGCAGGTGCTCGACGTGGACGAGGCCACCGCGCTGGTGGAGACCGACAGCGGCGGCAAGCTCGCCGTGCGCGACCGCGCGATGCTGGAGCTGTTCTACTCCAGCGGCCTGCGCCTGTCCGAGCTGTGCGGCTTGCGCTGGCTCGACCTCAAGCTCGACGACGGCGAGGTGCGCGTGCTGGGCAAGGGCAGCAAGACGCGCATCGTGCCGGTCGGCCGCCACGCCGTGGCCGCGCTTCGTGCGCTCGGCGCCGAGCAGGGCATGCCGCCGGACGGCCCGGTATTCCGCGGCCGCGGCGGCGCGCCGATCCATCCACGCACGATCCAGTTGCGCATGAACACCCTCGCGCTGCAGCAGGGCATCCCGAAACACATCCATCCGCATCTGCTCAGGCACACCTTCGCCAGCCACATGCTGGAATCCTCCGGCGACCTGCGCGCTGTGCAGGAGCTGCTCGGTCACGCCGACATCGCCACCACCCAGATCTACACCCACCTGGATTTCCAGCATCTGTCCAAGGTGTACGACGCGGCGCATCCACGGGCCAAAAGGAAGCCGTAG
PROTEIN sequence
Length: 302
MSPEPVVTPAGQVDAWLARLAGERHASPHTVAGYRRDLDKLLRFMAAGQVGTFEALDGARMRAFIAGEHRAGLAPKSLQRLLSSCRSLFRQLGREGTLSHDPLLGVRGPKVRRKLPQVLDVDEATALVETDSGGKLAVRDRAMLELFYSSGLRLSELCGLRWLDLKLDDGEVRVLGKGSKTRIVPVGRHAVAALRALGAEQGMPPDGPVFRGRGGAPIHPRTIQLRMNTLALQQGIPKHIHPHLLRHTFASHMLESSGDLRAVQELLGHADIATTQIYTHLDFQHLSKVYDAAHPRAKRKP*