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SCNpilot_expt_1000_bf_scaffold_4717_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(4587..5456)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 276.0
  • Bit_score: 482
  • Evalue 4.50e-133
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 280.0
  • Bit_score: 478
  • Evalue 1.90e-132
  • rbh
Diaminopimelate epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 276.0
  • Bit_score: 482
  • Evalue 3.20e-133
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGCGCCGGCGCCACTGCGCTTTTCCAAGATGCACGGCAGCGGCAACGACTTCGTCGTGCTGGACTGCCGGCGGCAGGCGTTCGCGCTCGACGCGGTGCAGATCCGCGCGCTGGGTGATCGCCACACCGGCGTGGGCTTCGACCAGCTGCTCAGCGTGGAGCCGGCGCGCGATCCGTCGTGCGCGTTCTACTACGGCATCTGGAACACCGACGGCTCGCCGTCAGGCCAGTGCGGCAACGGCGTGCGCTGCGTGGCGGCGTGGTTGCATCGTGCCGGCGCGCTGGCGCTGGACCAGGCGGTGCGCATCGAGAGTCCGTCCGGACCGGTGACGGTGCGCGTGCTCGCACCGGACGAGGTCACCGTGGACATGGGCGAGCCGATCTTCGAACCGGCGCGGATTCCGTTCGCGGCCGCGGCGACGGCCGCGCATTACCCGATCGAGGTCGGCGGCGATACGCTGGACATCGGCGCCGTCTCGATGGGCAATCCGCATGCGGTAGTGACCGTCGATGACCTGGCCGATCCCGCGCTGGAACGGCTCGGCCCGCTGCTGACCCGGCATCCGCGCTTCGCCGAAGGCGCCAACGCCGGCTTCGTGCAGCGGCTGGACCGCAGCCACCTGCGCCTGCGCGTGCACGAGCGCGGCGCCGGCTGGACCCGCGCCTGCGGCACCGGGGCCTGCGCCGCGATGGCGGTGCTGCACCGGCGCGGCGAAGTGGATGAGCGCGTCGCGGTGGCGCTGCCCGGCGGCAGCCTGCGCATCGACTGGGCCGGCGCCGGCCATGCGCTCTGGATGACCGGCCCGGCGGCCTTCGTTTTCGAGGGCGAATGGGCGCTTCCCCGCGTCGAACCGCCGCCGGCCGGTTGA
PROTEIN sequence
Length: 290
MAPAPLRFSKMHGSGNDFVVLDCRRQAFALDAVQIRALGDRHTGVGFDQLLSVEPARDPSCAFYYGIWNTDGSPSGQCGNGVRCVAAWLHRAGALALDQAVRIESPSGPVTVRVLAPDEVTVDMGEPIFEPARIPFAAAATAAHYPIEVGGDTLDIGAVSMGNPHAVVTVDDLADPALERLGPLLTRHPRFAEGANAGFVQRLDRSHLRLRVHERGAGWTRACGTGACAAMAVLHRRGEVDERVAVALPGGSLRIDWAGAGHALWMTGPAAFVFEGEWALPRVEPPPAG*