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SCNpilot_expt_1000_bf_scaffold_1280_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(7179..7526)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S16 n=2 Tax=Rhizobium/Agrobacterium group RepID=RS16_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 118.0
  • Bit_score: 203
  • Evalue 1.50e-49
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 118.0
  • Bit_score: 203
  • Evalue 4.70e-50
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 118.0
  • Bit_score: 203
  • Evalue 2.10e-49

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGTCCCTGAAGATTCGTCTCGCCCGCGGCGGTTCCAAGAAGCGTCCTTACTACCACGTCGTCGTTGCCGACGCCCGTTCGCCGCGTGACGGCCGCTTCATCGAGAAGATCGGTTCCTGGAACCCGATGCTCGGCAAGGAAGACGCCAAGCGCATCGAGCTGGATGCCGACCGCATCAAGCATTGGCTCGACAACGGCGCCCAGCCGACCGACCGCGTCCTGCGCTTCCTCAACGAAGCCGGCCTTGCCAAGCGCGACGCCCAAAAGGGCAAGCCGGGCAAGAAGGCCCAGGAACGCGCCGCCGAGAAGGCCCAGAAGGCCGCCGACGCCGCTGCTGCCGCCGAATAA
PROTEIN sequence
Length: 116
MSLKIRLARGGSKKRPYYHVVVADARSPRDGRFIEKIGSWNPMLGKEDAKRIELDADRIKHWLDNGAQPTDRVLRFLNEAGLAKRDAQKGKPGKKAQERAAEKAQKAADAAAAAE*