ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1502_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(432..2063)

Top 3 Functional Annotations

Value Algorithm Source
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 538.0
  • Bit_score: 483
  • Evalue 6.50e-134
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Rhizobium sp. CF080 RepID=J3CGQ1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 537.0
  • Bit_score: 729
  • Evalue 2.20e-207
Uncharacterized protein {ECO:0000313|EMBL:KGD87354.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 533.0
  • Bit_score: 738
  • Evalue 6.50e-210

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1632
ATGCACGCTCTCTCTCCCTATCTGGCCTTGGAGCACCGGGCCCGGCAGCATCCCGACGATACGCTCATCGTCCTGCCGAAGGCGGCGCGTCTTGCTTATGCGCCGGACGGCCTGACGTTCTCCTATGGGGAGATGTTCGCGGCCGTCTCCCGTCTGAAGGCGATGTTTGCCGCGGCAGGCTACGGCGCCGGCCACCGGGTGGCGCTGCTGCTCGAAAATCGTCCGGAATTCTTCGCCTACTGGCTGGCGCTGAACGGGCTCGGCGTCTCCATCGTTCCGGTCAATCCGGATCTGCGGCCGGGCGAATTGCACTATCAGCTTTCGCTGTCCGAAACCGGGCTGCTGGTCGCCTTGTCGAAAGACGCTGCCACGCTGGAAGGCCTCGATGTCGACGGCCTTGCCGTCATCGAGGCGGGCGATCCGCCGCCGCCAGCGCGCAACCCGGCATCGCGCCAGCACGGCCTTGCGGATGACGAATGCGCCCTGCTGTTCACGTCCGGCAGCACCGGCAAACCGAAAGGCTGCATGCTGTCCAACGCCTATTTCATGACGCTTGCCGACTGGTATGTGACCCAGGGCGGCATCGCCGCCATCCGGGAGCGCTCGGAAGTGGCGCTGACACCCCTGCCGATGTTCCACATGAACGCCCTTGGCTGTACCGCTCTCGGCATGATCGTCTGCGGCGGCGCCTTCGTGCCGCTCGACCGGTTCCATGCCAGCCGCTGGTGGGAGACGGTCAGCCAGTCGTCAGCCACCATCGTCCATTGCCTCGGCGTCATTCCCGCGATCCTGCTGCGCCTGCCGCCCTCGCCGTTCGACCGCGATCACACGGTAAGGTTCTCGTTCGGCCCCGGCGTCGATGCGCAGCACAAGATCGAGTTCGAGGCGCGCTATCGCATTCCCATCGTCGAAGCCTGGGCAATGACCGAAACCGGCGGGCGGGCCACGACCACGACGGCGCGCGACGACTATACGCCCGGCCTGCGCTGCATCGGACGTCCGCGCGCGGGCATGGACCACCGCATCGTCGACGATGCCGGCCGACCTGTGCCCCTCGGCACGCCCGGAGAACTGATCGTCCGCGCCGCCGGAGCGGATCCGCGCCAGGGCTTCTTCAGCGGATATCTGAAGGACGAGGTCGCGACCGAGGAGGCATGGGCCGGCGGCTGGTTCCATACCGGCGACATCATTCACGAGGACGACAGGGGGCTTCTCTACTTCTTCGACCGCAAGAAGAGCATCGTGCGCCGCAGCGGCGAGAACATTGCCGTGCTGGAGGTGGAAGCCGCGCTTTCGGCCAGCGCCGCGGTCAAGGCGGTGGCGGTGACGCCGGTTGCGGACGCGTTGCGCGGCGAGGAGGTCTTCGCCTTCATCGTTCGGGCCGAGACTGCCGGTGGCGATGCGCCGGAAAGCCTTGCGGAAGACCTGGTTCGCGAGGCCGCCGAGCGTCTGGCCTATCACAAGCTGCCGGGCTATATCGTCTTCGTCGACGCTCTGCCGCTGGGGTCCACCCAGAAATTGCAGCGCGGCGAGATCAAGGCGATGGCCGCCGGGCGCATCGAGCGCGGAAATGCGTTTGACCTGCGCGCGCTCAAGGCCGCCCTGCGGCGCAAACCGGTCTCCGCGTCATGA
PROTEIN sequence
Length: 544
MHALSPYLALEHRARQHPDDTLIVLPKAARLAYAPDGLTFSYGEMFAAVSRLKAMFAAAGYGAGHRVALLLENRPEFFAYWLALNGLGVSIVPVNPDLRPGELHYQLSLSETGLLVALSKDAATLEGLDVDGLAVIEAGDPPPPARNPASRQHGLADDECALLFTSGSTGKPKGCMLSNAYFMTLADWYVTQGGIAAIRERSEVALTPLPMFHMNALGCTALGMIVCGGAFVPLDRFHASRWWETVSQSSATIVHCLGVIPAILLRLPPSPFDRDHTVRFSFGPGVDAQHKIEFEARYRIPIVEAWAMTETGGRATTTTARDDYTPGLRCIGRPRAGMDHRIVDDAGRPVPLGTPGELIVRAAGADPRQGFFSGYLKDEVATEEAWAGGWFHTGDIIHEDDRGLLYFFDRKKSIVRRSGENIAVLEVEAALSASAAVKAVAVTPVADALRGEEVFAFIVRAETAGGDAPESLAEDLVREAAERLAYHKLPGYIVFVDALPLGSTQKLQRGEIKAMAAGRIERGNAFDLRALKAALRRKPVSAS*