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SCNpilot_expt_1000_bf_scaffold_1574_17

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 15603..16460

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC spermidine/putrescine transporter, inner membrane subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFW5_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 273.0
  • Bit_score: 270
  • Evalue 2.50e-69
spermidine/putrescine ABC transporter inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 273.0
  • Bit_score: 270
  • Evalue 7.70e-70
Putative ABC spermidine/putrescine transporter, inner membrane subunit {ECO:0000313|EMBL:CCB65474.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 273.0
  • Bit_score: 270
  • Evalue 3.40e-69

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGCGACGGCGCACCGCTTTCCCTGAAACGCGACGGGGCGCTGCTGCTGCCGGCCGCCGCCGTGCTCGCCGGGCTGTTCATCGGCCCGATGCTGTATTTCCTCGTCGTGTCCTTCTTCAAGGTCTCGCTGTTCAAGATCGTGCCGGGTTTCGATCTCGGCAATTACGCCAAGGTGGTCGGCTCCTACGGCCCGCCCATCCTGTTCACCATGGGCATCGGCTTCCTGATCGCCAGCGTCACCACCGTGCTCGCCTTTATCGTCGCGCATCTGATCTGGACGCGCGGTCGCCGCTTCAGCGGCATCCTGCTGGCGGCGACGCTGCTGACGCTGTTCGGCGGCTATCTCGTCAAGATCTATGCCTGGCGCACCCTTCTCGGGCGGGACGGCATCGTCAACAACACGCTGGTCGGCCTCGGTATCGTGCGCGAGCCGATCGAGGCGCTGCTCTATAGCCCGGTCGCCGTGGTGCTGGTGCTGGTCAGCTACCTGCTTCCCTTCGCCATCCTGCCGCTCTACGGCGCCTTGCGCTCCATCGAGGAGAAGACCATCGAGGCGGCGCGCGATCTCGGGGCCTCGCCCTGGGCTGCGGTGCGCGATGCGGTGCTGCCGCGCTGCGTGCCGGCGCTGGTCACCGCCTTCGCGCTCTGTTTCCTGGTCACGGCGGGGGATTACGTGACGCCGCGCATGGTCGGCGGCACCCGCACGATGATGATGGGCAATTTCATCGAAAGCCAGTTCGGCCTGCGCATGAACGTGCCGCTCGGCGCGGCGATGACCTATCTCACCATTACGGCCTCCATCGCCGTGATCGCTTTCGTCTGGCTCGCGCTCAAAACCGTGTTGAGGCCCAAATGA
PROTEIN sequence
Length: 286
MSDGAPLSLKRDGALLLPAAAVLAGLFIGPMLYFLVVSFFKVSLFKIVPGFDLGNYAKVVGSYGPPILFTMGIGFLIASVTTVLAFIVAHLIWTRGRRFSGILLAATLLTLFGGYLVKIYAWRTLLGRDGIVNNTLVGLGIVREPIEALLYSPVAVVLVLVSYLLPFAILPLYGALRSIEEKTIEAARDLGASPWAAVRDAVLPRCVPALVTAFALCFLVTAGDYVTPRMVGGTRTMMMGNFIESQFGLRMNVPLGAAMTYLTITASIAVIAFVWLALKTVLRPK*