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SCNpilot_expt_1000_bf_scaffold_1574_21

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(19281..20168)

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide deacetylase n=1 Tax=Sphingomonas wittichii RepID=UPI0002E10FB1 similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 287.0
  • Bit_score: 343
  • Evalue 1.80e-91
  • rbh
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 287.0
  • Bit_score: 343
  • Evalue 7.40e-92
  • rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ABQ67295.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 287.0
  • Bit_score: 343
  • Evalue 3.30e-91

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCCGACACGCTGTGCCCTGACCTTCGATTTCGACGCCATGTCCGTGTGGCTCGGCTCCTACAAGACGCGCAATCCCTCAATGGTATCGCGCGGCGAGTTCGGCGCCATCGCCGTGCCGAGCATCCTCGATCTTCTGGGCAAACATCGCCTGCCGGGAACCTTCTGCATTCCCGGCCATACCGCGCTTGCCTATCCCGATATCGTCAAGCGCATCCGCGACGAGGGCCACGAGATCGTCCATCACGGCTGGGTGCATGAAAACCCGGCGGAGTTCGACGAGGCCGGCGAGCGCGAGAATATCGAAAAGGGGCTGGAGGCGCTGCACAAGGCGGCGAACGTGCGCCCGAAGGGCTATCGCTCCCCCTCCTGGGATTTTTCCGAGCGCACCATCAAGATCCTGCTCGACTACGGTTTCAGCTATGATTCAAGCCTGATGGGGTCGGATTTCATTCCCTATTATGCCCGCATCGACGACCGTTTCGACGACAAGACGCCCTACCATTTCGGGCCGAACGTCGATCTGGTCGAGCTGCCGGTCGCCTGGGTGATGGACGATTTCCCGCATTTCGAATTCGTCGACAAGGACACCTACGGTCTCTCGGCCCCCTCCAAGGTCGAAGAGATCTGGCGGGACGAATTCGATTATGTTCACAACAACATTCCGGATGCGCTGTTCTCCATCACCATGCATCCACAGGTGATCGGCCGAGGCCACCGGCTGATGATGCTGGAGCGGCTGATCGAAGATTTTTCCCGCCGCGACGGCGTCACCTTCTCCACCATGGGCGCCTATGCCGAACGCTGGCGCGCGGAAAACCCACTTGCCGAATGGCTGACATCCGGTGCGCCGCAGGCGCAATCGGCCTGCGGCCGCGACGCGCTTTAA
PROTEIN sequence
Length: 296
MPTRCALTFDFDAMSVWLGSYKTRNPSMVSRGEFGAIAVPSILDLLGKHRLPGTFCIPGHTALAYPDIVKRIRDEGHEIVHHGWVHENPAEFDEAGERENIEKGLEALHKAANVRPKGYRSPSWDFSERTIKILLDYGFSYDSSLMGSDFIPYYARIDDRFDDKTPYHFGPNVDLVELPVAWVMDDFPHFEFVDKDTYGLSAPSKVEEIWRDEFDYVHNNIPDALFSITMHPQVIGRGHRLMMLERLIEDFSRRDGVTFSTMGAYAERWRAENPLAEWLTSGAPQAQSACGRDAL*