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SCNpilot_expt_1000_bf_scaffold_1833_26

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(28239..28745)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H6Z6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 168.0
  • Bit_score: 262
  • Evalue 2.30e-67
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ENN87226.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 168.0
  • Bit_score: 262
  • Evalue 3.30e-67
transcriptional regulator, MarR family similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 168.0
  • Bit_score: 252
  • Evalue 7.50e-65

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGGACGACCGGTTCGCAGGCATGGCGCGGAAGCGCAAGCGGGATACGGCCGAGCCGGCGCCCACACTCGGCGAAATCGGCCTCAACCAGTTCGCCCCCTATCTGATGAACCGGGTCATCGCTCGCTGGAACGCCAATATGGCCGAGGATCTCAAGGCGATGGATCTCTCCACCGCCAAGATGCGGGCGCTCGCCGTTCTTTCCATCACCCCTTCGGTCACCATTAACGAATTGTCGGTCTTTGCCGTTACCGAGCAATCGACCATGAGCCGGACGCTGGATTCGCTGGAGGAGCAGGGCTTCATCCGCCGCCAACCGCGCGTCGAGGACATGCGGGTGCGCGACGTCACCATCACCGAGGAAGGCCGCACCGTCTTCGACAAGGTCTGGCCCACCATGTATGACAGCCTGCTGAAAATGTTCGACGGTGTCGAGGAAGACGAATACCGCGCCTTCCTTTCGGTGCTGCATCGGGTGCTGCACAATATCCGCAAGCACGATATCTGA
PROTEIN sequence
Length: 169
MDDRFAGMARKRKRDTAEPAPTLGEIGLNQFAPYLMNRVIARWNANMAEDLKAMDLSTAKMRALAVLSITPSVTINELSVFAVTEQSTMSRTLDSLEEQGFIRRQPRVEDMRVRDVTITEEGRTVFDKVWPTMYDSLLKMFDGVEEDEYRAFLSVLHRVLHNIRKHDI*