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SCNpilot_expt_1000_bf_scaffold_2245_20

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 18121..18984

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C03BB similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 287.0
  • Bit_score: 465
  • Evalue 4.00e-128
  • rbh
Transcriptional regulator RpiR family {ECO:0000313|EMBL:EYR81708.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 287.0
  • Bit_score: 461
  • Evalue 8.10e-127
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 287.0
  • Bit_score: 337
  • Evalue 3.00e-90

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGATCTCTTCCACGCCCTTTCAGACGAAGACGGCCGGCTTGCCGGCCTGGACAAGAAGCTCGCCCATCTCGTGCTGAAGGATGTCGAGGCGGTGATGAATGCCTCGATCAGCGAGCTTGCCGAGCGCGCCGGCGTTTCCCCGCCCACGGTGACGCGCTTCTGCCGGCGGCTCGGCTGCCAGGGCTATTCGGATTTCAAGGTGCAACTGGCGAAGATGCCCTATGTCGGCCTGCGTTACCTGGTGCCGGAGACGCCAACCGCGACACCGGAAGAAGTCGCCGAGGATATCGTCGCCAAGGCGCAAAACGCGCTGTTCCAGTTCCATCGCCAGATCGATCTCAAGGCGATGAACCAGGCCGCCCACCTGCTGCGCGGTTCCGAATTCATCTATGCCTTCGGCGCCAGTGGCAATTCGGCGATGATCGTCAACGAGTTGCATAATCGCCTGTTCCGGCTGGGCTGCCGCATCAATTCCTCCAACGATCACAACATGAACATCATGCTTTCCGCCTCCGCGCTGCCCGGTACGGTGGTCTTCGCCTCTTCCTTTACCGGCCGTGACCTCGGCGTCGTCGATTGTCTGGACGTGCTGCGCAAGCGCGCCATCCCGACCATCGTCATCACCCAGAGCGGCTCGCCGGTCGCCACCGCCGCCGATGTGGTCATTCCCATCGACCTGCCCGAGGGCAAGAACATCTTCCGCCCCACCTCCACCCGCTATGCCTATCTCGCAGCCATCGACATCCTTGCCAACCTCGTCGCCTACGCCGACCGCGGCAAGGCCACCAAGGCCCTGCGCAACATCAAGGAGGAACTGGTCAGACGGCGCGACGGCGACGATCGCCAGGTGCTGGGAGACTGA
PROTEIN sequence
Length: 288
MDLFHALSDEDGRLAGLDKKLAHLVLKDVEAVMNASISELAERAGVSPPTVTRFCRRLGCQGYSDFKVQLAKMPYVGLRYLVPETPTATPEEVAEDIVAKAQNALFQFHRQIDLKAMNQAAHLLRGSEFIYAFGASGNSAMIVNELHNRLFRLGCRINSSNDHNMNIMLSASALPGTVVFASSFTGRDLGVVDCLDVLRKRAIPTIVITQSGSPVATAADVVIPIDLPEGKNIFRPTSTRYAYLAAIDILANLVAYADRGKATKALRNIKEELVRRRDGDDRQVLGD*