ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2614_22

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(14980..16107)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbL n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGL4_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 283.0
  • Bit_score: 533
  • Evalue 2.00e-148
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 283.0
  • Bit_score: 533
  • Evalue 6.40e-149
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ACB81247.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 283.0
  • Bit_score: 533
  • Evalue 2.90e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylobacterium populi → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGGGCGGGACCGGCGTCATCGACCATTTCCTCGAGGTCTTCACCCGCTACATCGATGGCGGCTTCGGCCTGCTCGGCGGCGAGGTCGCCTTCATCGCCACCACGTTGATCGTCATAGATGTGGTGCTGGCAGCCCTCTTCTGGTCGTGGGGCGCCGATGAGGACATCATCGCGCGCCTGGTCAAGAAGACGCTCTTCGTCGGCGTCTTCGCCTACATCATCGGCAACTGGAACAATCTCGCCCGGATCGTCTTCGAGAGTTTTGCCGGCCTCGGCCTGAAGGCTTCCGGCACGGGCTTTACCGTCACCGATCTTCTTCGCCCCGGCAAGGTGGCGCAGACCGGCCTCGATGCCGGCCGGCCGCTGCTCGACTCCATCTCGAACCTGATGGGCTATTGGTCCTTCTTCGAGAACTTCATCCAGATCGCCTGCATGCTGTTTGCCTGGATGCTGGTGCTGCTCGCCTTCTTCGTCCTTGCCGTCCAGCTCTTCGTGACGCTCATCGAGTTCAAGCTGACGACGCTCGCAGGCTTCGTGCTGATCCCCTTCGGCCTGTTCGGCAAATCCGCCTTCATGGCCGAGCGCGTGCTTGGCAACGTGATTTCCTCCGGCATCAAGGTGCTGGTGCTCGCCGTCATTATCGGCATCGGCTCGACGCTGTTCTCCGAGTTCACTGCCGGCTTCGGCGGCGCGACGCCTTCGATCGATGACGCGATGGCGATCGTGCTCGCTGCGCTATCGCTGCTCGGCCTCGGCATCTTCGGCCCCGGCATAGCCAATGGCCTGGTCTCGGGCGGTCCGCAGCTTGGGGCTGGCGCCGCGGTCGGCACGGGTCTCGCCGCCGGTGGCAGGTATGGTTGCCGCTGGCGCCGCCACGGTCGGCGCAGTCGCCTCTGGGGGTGCGGCACTGGCAGGAGGCGCTGCCGCCGCAGCTCGTGGCGGGGCCGCGATCGCGGGCGGGGCCTCCACGGCCTACAGCCTTGGCGCCGCCGGACAGTCAGGCGCCTCGGCCGTCGCATCTGGACTCGGCAATGTCACCAACACGGGCGCGAAGGCCGCTGTCTCGCCGCTGAAACGCGCTGCCGGCCGCGCCGCCGACAGCCTGAAGCAGAGCTACCAAGGCGGTAG
PROTEIN sequence
Length: 376
MGGTGVIDHFLEVFTRYIDGGFGLLGGEVAFIATTLIVIDVVLAALFWSWGADEDIIARLVKKTLFVGVFAYIIGNWNNLARIVFESFAGLGLKASGTGFTVTDLLRPGKVAQTGLDAGRPLLDSISNLMGYWSFFENFIQIACMLFAWMLVLLAFFVLAVQLFVTLIEFKLTTLAGFVLIPFGLFGKSAFMAERVLGNVISSGIKVLVLAVIIGIGSTLFSEFTAGFGGATPSIDDAMAIVLAALSLLGLGIFGPGIANGLVSGGPQLGAGAAVGTGLAAGGRYGCRWRRHGRRSRLWGCGTGRRRCRRSSWRGRDRGRGLHGLQPWRRRTVRRLGRRIWTRQCHQHGREGRCLAAETRCRPRRRQPEAELPRR*