ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2614_28

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(20348..21328)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbB n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G733_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 330.0
  • Bit_score: 571
  • Evalue 7.70e-160
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EQA99585.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 330.0
  • Bit_score: 571
  • Evalue 1.10e-159
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11 similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 326.0
  • Bit_score: 561
  • Evalue 2.50e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCTACGCACCGCACTCGGCCCGGCCATTGCCCGATTTCTCGAAGATGCCTCCGTCGTTGAGGTGATGCTGAACCCGGACGGGTGCATCTGGATCGATCGTCTCTCCGAAGGGCTGTCCAACACAGGTGAGCGGCTATCACCGGCGGATGGCGAACGCATCGTGCGCCTGGTCGCGCACCATGTCGGCGCGGAGGTTCACTCTGGCGCTCCGCGTGTCTCGGCCGAGCTGCCGGAAACGGGGGAACGGTTCGAGGGGCTGTTGCCGCCCGTGGTCGCGGCTCCGGCCTTCGCAATCCGTAAGCCTGCCGTCGCCGTCTTCACGCTCGACGATTACGTCACGGTCGGCATCATGTCCGCCGGACAGGCCGAAGCATTGCGCCACGGTGTTGCGTCGCGCGCCAATATCCTCGTCGCGGGCGGCACCTCCACCGGCAAAACGACGCTGACGAATGCGCTGCTGGCCGAGGTCGCAAAGACCTCCGATCGCGTCGTCATCATCGAGGACACACGCGAACTGCAATGCGCAGCACCCAACCTCGTCGCCATGCGAACGAAGGACGGCGTCGCCTCGCTCTCCGATCTCGTCCGATCCTCTCTCCGCCTGCGCCCCGACCGCATCCCGGTCGGCGAAGTACGCGGCTCGGAAGCGCTCGACCTGCTCAAAGCCTGGGGCACCGGCCATCCCGGCGGCGTCGGCACCATCCACGCAGGCAGCGCCATCGGCGCGCTCAGGCGGATGGAACAGCTCATCCAGGAAGCCGTCGTCACCGTGCCCCGCGCCCTGATCGCCGAGACTATCGACCTTGTGGCGGTTCTCTCTGGCCGCGGCTCTTCGCGTCGGCTTTCCGAGCTCGCCCGTGTCGAGGGCCTCGGCCCTGGCGGCGACTACCGCGTCACGCCTGCCGTCACGGCCTTGGCTGCCGAGGGCGACGAAGGTGCGACCTCTATCCCCACCAGCCCCGAAGGAGAAAACCTGTGA
PROTEIN sequence
Length: 327
MLRTALGPAIARFLEDASVVEVMLNPDGCIWIDRLSEGLSNTGERLSPADGERIVRLVAHHVGAEVHSGAPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLDDYVTVGIMSAGQAEALRHGVASRANILVAGGTSTGKTTLTNALLAEVAKTSDRVVIIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPVGEVRGSEALDLLKAWGTGHPGGVGTIHAGSAIGALRRMEQLIQEAVVTVPRALIAETIDLVAVLSGRGSSRRLSELARVEGLGPGGDYRVTPAVTALAAEGDEGATSIPTSPEGENL*