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SCNpilot_expt_1000_bf_scaffold_4310_9

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 5902..6795

Top 3 Functional Annotations

Value Algorithm Source
LysR-family transcriptional regulator n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2J0_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 295.0
  • Bit_score: 440
  • Evalue 1.10e-120
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 295.0
  • Bit_score: 440
  • Evalue 3.40e-121
LysR-family transcriptional regulator {ECO:0000313|EMBL:BAI96822.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 295.0
  • Bit_score: 440
  • Evalue 1.50e-120

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGATCGAGTTGCGTCATATCCGATATTTCGTCGCTGCATCCGAGCATGGCAGCTTCCGAAAGGCAGCTCACGCGCTCGGTATCCGGGAATCGGCCGTCAGCAGGCGCATACGCGATCTTGAGGACGAACTCGGCGCCTCACTTTTTCATCGGCACAATGGCGGTGTGAGCCTTACGCAAGCGGGCCAGCACTTTCTACTTCGAGCGCGCAAAGCGCTTAGGCAAATCGGCGAAGGGGCACGAGACGTTGCCGCCATCGGGCGTTGCGAGGACGGACGCGTCAAGATCGGCATCTTCTCCTCACTCGCTTCGGGCTTCCTCTCCGATCTGCTTCGAGTTTACGATCAAAACCATGCAGGCGTGCGAATCGAATTCGTCGATGGCAATCCCGCAGAACACGTCTCCGCCATCCGCCAACTACGTCTCGATGTAGCCTTTATTACGGGGACATCCGGCTGGTCGGAGTGCGAGACCGATCATTTATGGTCTGAACGGGTCTTTGCCGTACTCCCTGGCAGCCATCCTCTCGCCGACAAAGTCGAGTTGGACTGGTCCGATCTCGCTGGCGAGATCTTTATCGTCAGCGATACCGCACCCGGACCGGAGATTCACGACTATCTTGTGCAACGTCTCGCTGATCTGGGCTATCACCCTGAAGTTCATCCTCAGCATGTTGGGCGCGACAATCTTTTATCGCTCGTAGCGGTTGGCCGCAGACTGACGTTAACCAGCGAAGCAACGACAGTCACCCATCTGCCGGGTATCGTCTATCGCCCCATTACAAAGGAAATATTGCCATTCAGCGCCGTGTGGTCGCCAAGGAATGACAATCCAGCTTGCCGTCGGCTTTTGAGTCTTGCGCGCTCTATGGCCCGATCGAGCAAGGTGGTCTAG
PROTEIN sequence
Length: 298
MIELRHIRYFVAASEHGSFRKAAHALGIRESAVSRRIRDLEDELGASLFHRHNGGVSLTQAGQHFLLRARKALRQIGEGARDVAAIGRCEDGRVKIGIFSSLASGFLSDLLRVYDQNHAGVRIEFVDGNPAEHVSAIRQLRLDVAFITGTSGWSECETDHLWSERVFAVLPGSHPLADKVELDWSDLAGEIFIVSDTAPGPEIHDYLVQRLADLGYHPEVHPQHVGRDNLLSLVAVGRRLTLTSEATTVTHLPGIVYRPITKEILPFSAVWSPRNDNPACRRLLSLARSMARSSKVV*