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SCNpilot_expt_1000_bf_scaffold_4477_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1261..2562)

Top 3 Functional Annotations

Value Algorithm Source
sn-glycerol-3-phosphate-binding periplasmic protein UgpB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XFM7_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 433.0
  • Bit_score: 740
  • Evalue 1.30e-210
ugpB2; sn-glycerol 3-phosphate ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 433.0
  • Bit_score: 740
  • Evalue 4.00e-211
sn-glycerol-3-phosphate-binding periplasmic protein UgpB {ECO:0000313|EMBL:AFL54683.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 433.0
  • Bit_score: 740
  • Evalue 1.80e-210

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGTTGAAGAAAATTTCCCTGGCCGTGACGGCCATCGCATTTTCGGCCACGACTTCGTTTGCCGCCACCACCAACATTACCTGGTGGCACGGCATGAGCGGCAAGAACGGCGAGGTCATCAACGAAGTCGCCAAGAAATTCAACGCCGCCCAAACCGCTTGCGCGATCACCCCGGTTTCCAAGGGCACCTATGAAGAGGCGCTCGCCGCCGGCATCGCCGCCTTCCGTTCGGGCGAGCAGCCGAACATCCTGCAGGTCTTCGATGCGGGTGCGGCCACCATCATCAACGCCAAGGGCGCCGTCATCCCGGCCGAGGATCTGATCCTCAAGGCCGGCCATAAATTCGAGCGCGACGCCTTCCTCGACGGCATCCGCTATTTCTATGCCGACCAGTCCGGCAAGTTCGTCGGCATGCCGTTCAATTCCTCGGCGCCGATCATGTACATCAACACCGATGCCCTGAAGAAGGCCGGTGTCGAGGCTCCCAAGACCTGGGAAGACTTCGAAGCCATCGCGCCGAAGCTGAAGGAAGCCGGCTTCGTGCCGCTCGTCCAGTCGCAGCTGACCTGGGAATTCACGGAAAACTTCTTCTCGCGCAACAACGTCCAGTTCGCCTCCAACAACAACGGCTACGAAACGACCGAAGGCACGACGCTGAACGTCACCGATCCCAAGCTGGAAATGATGTTCACCAAGCTCAAGGACTGGGCCGACAAGGGCTGGTTCGGTTATTACGGCGCCGGCTGGTCCGACAACCAGAAGGTTTTCGAGGAAAACAAGGCGGCCCTGTGGATCGGTTCCTCCGGCTCGTTCGGCGGCCTGCAGAAGACCGCCAAGATGCCCTTCTCAGCCGATTTCCTGCCCTATTGGGGCTCGATCCAGGGTGCCGGCACCAATTCCTTCATCGGTGGCGCGGCTCTGTTCGCCATGGCCGGCAAGCCGGATGCGGAAAACAATTGCGTCGCCGATTTCTTCCAGTTCCTGACCTCGCCGGAAATCCAGGCCTATTACCACAAGGAAACCGGCTACGTGACCGTCACCAAGGCGGCCTACGAACTGGCCAAGAAGGAAGGCTGGTATAACGAGAAGCCGGTCGCCGAAGTCGGCATCAAGCAGCTCATGCTGCCCTCGGGCGAATGGTCCAAGGGCTATCGCCTCGGCTTCTACCCGCAGATTCGCGAGATCATGGAACGCGAATACAACCGCATCTTCGCCAACGAAACCTCGGTCAAGGACGGTCTCGAAACCATCAAGAAGGAAGGTGACGCCCTGCTCGCCCGCTTCGCCAAGACCGCCGGCTGA
PROTEIN sequence
Length: 434
MLKKISLAVTAIAFSATTSFAATTNITWWHGMSGKNGEVINEVAKKFNAAQTACAITPVSKGTYEEALAAGIAAFRSGEQPNILQVFDAGAATIINAKGAVIPAEDLILKAGHKFERDAFLDGIRYFYADQSGKFVGMPFNSSAPIMYINTDALKKAGVEAPKTWEDFEAIAPKLKEAGFVPLVQSQLTWEFTENFFSRNNVQFASNNNGYETTEGTTLNVTDPKLEMMFTKLKDWADKGWFGYYGAGWSDNQKVFEENKAALWIGSSGSFGGLQKTAKMPFSADFLPYWGSIQGAGTNSFIGGAALFAMAGKPDAENNCVADFFQFLTSPEIQAYYHKETGYVTVTKAAYELAKKEGWYNEKPVAEVGIKQLMLPSGEWSKGYRLGFYPQIREIMEREYNRIFANETSVKDGLETIKKEGDALLARFAKTAG*