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SCNpilot_expt_1000_bf_scaffold_4477_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 5403..6020

Top 3 Functional Annotations

Value Algorithm Source
TerC family transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2U5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 203.0
  • Bit_score: 330
  • Evalue 1.10e-87
TerC family transporter {ECO:0000313|EMBL:EYR77838.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 203.0
  • Bit_score: 330
  • Evalue 1.50e-87
transporter protein, TerC family similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 201.0
  • Bit_score: 326
  • Evalue 6.50e-87
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGATATCTTCACGGCCGCCGGCCTGACGGCGCTTCTGCAAGTCATCGCAATCGATCTCGTTCTGGCCGGTGACAATGCCGTGGTGATCGGTCTCGCGGCGGCGGGCCTCGAAGCCACCCAGCGTCGCAAGGCGATCCTCGTCGGTATTCTGGTCGCGACGGTGCTGCGCATTCTCTTCGCCACCATCGCCGTTCATCTGCTGGCGATCATCGGGCTGCTGCTGGCCGGCGGCCTGCTGCTGCTATGGGTGTGCTGGAAGATGTGGCGCGAGCTGCGGTCCGGCCAGAGTGACGAAACGGAGGCGGAGAATGCGGCCGCCCCGAAGAAGTCCTTCGCCCAGGCGGTCATGCAGATCGTCGTCGCCGACGTCTCCATGTCGCTCGACAACGTGCTTGCGGTCGCCGGTGCGGCGCGCGAACATCCGAGCGTCCTGATCGTCGGCCTCGCTTTGTCGATCGCGCTGATGGGCATTGCCGCGAACTTCATCGCCCATTTGCTCAACAGGCATCGCTGGATCGCCTATATCGGCTTGGCGATCATTCTCTATGTCGCGCTCGACATGATCTATCGCGGCGCCCAGGAAGTCATGCCCTATGTCGCGGCGGCCGCCGGCTGA
PROTEIN sequence
Length: 206
MDIFTAAGLTALLQVIAIDLVLAGDNAVVIGLAAAGLEATQRRKAILVGILVATVLRILFATIAVHLLAIIGLLLAGGLLLLWVCWKMWRELRSGQSDETEAENAAAPKKSFAQAVMQIVVADVSMSLDNVLAVAGAAREHPSVLIVGLALSIALMGIAANFIAHLLNRHRWIAYIGLAIILYVALDMIYRGAQEVMPYVAAAAG*