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SCNpilot_expt_1000_bf_scaffold_5142_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3..404

Top 3 Functional Annotations

Value Algorithm Source
Chemoreceptor McpA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5A3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 133.0
  • Bit_score: 182
  • Evalue 3.20e-43
Chemoreceptor McpA {ECO:0000313|EMBL:EYR83722.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 133.0
  • Bit_score: 182
  • Evalue 4.40e-43
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 133.0
  • Bit_score: 170
  • Evalue 5.10e-40

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
GTGGCGCAGGAGGTGCGAGAGCTTGCCCAGCGCTCGGCGCAGGCGGCCAAGGAAATCAAGGGGCTGATCAGCAATTCCGCCGACGAGGTCGGCAATGGCGTGGCGCTGGTGCGCTCCACCGGCGAGGCGCTCGGCGAAATCGAGAAGCTGGTCAACCAGGTGAACGCCCAGGTGGAATCGATCGCCATGTCGGCGCGGGAGCAGTCGGTCGGGCTTGCGGAGGTCAATACCGCCGTCAACCAGATGGACCAGATGACCCAGCGCAACGCCGCCATGGTTGAGGAAACCAATGCCGCCAGCCAGACGCTGACACAGGAGAGCAACGAGCTGTTGCGCCTCATCGGCAGTGTCCGTCTCTCGGACGGCGCACGGGTGCAGCCAGGACAGCGCCGGGCGGCCTGA
PROTEIN sequence
Length: 134
VAQEVRELAQRSAQAAKEIKGLISNSADEVGNGVALVRSTGEALGEIEKLVNQVNAQVESIAMSAREQSVGLAEVNTAVNQMDQMTQRNAAMVEETNAASQTLTQESNELLRLIGSVRLSDGARVQPGQRRAA*