ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8245_4

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(3454..4221)

Top 3 Functional Annotations

Value Algorithm Source
Ferric transport system permease protein FbpB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEF0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 255.0
  • Bit_score: 477
  • Evalue 9.10e-132
Iron ABC transporter permease {ECO:0000313|EMBL:KJF67963.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 255.0
  • Bit_score: 479
  • Evalue 2.60e-132
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 255.0
  • Bit_score: 432
  • Evalue 1.10e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
GTGGCGGTGTTCATCCTCGGCATGATCGCCATGTGCCAGCTCGCAGCACTCGTCAAGTTCTGGCCCTACGACATGACGCTGACCACCAGGAATTTCGCCTTCGACCTGATGGATGGTGGCGGCTGGGCGGCCTATTCCAACTCGATCAAGCTCGCTCTTCTGACGGCGCTGTTCGGTTCGCTCGTCGTCTTTGCCGGCGCCTATATGGTGGAAAAGGCCGATGGCTTCCGCACCGGCCGCTCGATCTTCCATTTCCTGGCGATGATGCCGATGGCGGTGCCGGGCATGGTGCTGGGTCTGGCCTATATCTTCTTCTTCAACAATCCGGCCAATCCGCTGCATTCGATCTATGGCACGATGACCATCCTCGTCGTCTGCACGGTGACCCATTTCTACACCGTCGCGCATCTGACGGCGCTGACGGCGCTCAAGCAGATGGATCCGGAATTCGAATCCGTCGCTGCCTCGCTGAAGCAGCCCTTCCACCGGCTGTTCTTCCGGGTAACGGTGCCGGTCTGCCTGCCGGCGATCCTCAACATCGCCATCTATCTCTTCGTCAATGCGATGACGACCGTCTCGGCCGTGGTCTTCCTCTATTCCACCGAGACGAAACTCGCCTCCGTCGCCGTGCTCAACATGGACGATGCCGGCGATATCGCACCGGCGGCGGCCATGGGCATGATGATCTTCTACACCAATGTCGCCGCCAAGCTGATCCACGCCCTGATCGCCCGCGGCCTGCTCGCCCGCACCCAGGCCTGGCGCTGA
PROTEIN sequence
Length: 256
VAVFILGMIAMCQLAALVKFWPYDMTLTTRNFAFDLMDGGGWAAYSNSIKLALLTALFGSLVVFAGAYMVEKADGFRTGRSIFHFLAMMPMAVPGMVLGLAYIFFFNNPANPLHSIYGTMTILVVCTVTHFYTVAHLTALTALKQMDPEFESVAASLKQPFHRLFFRVTVPVCLPAILNIAIYLFVNAMTTVSAVVFLYSTETKLASVAVLNMDDAGDIAPAAAMGMMIFYTNVAAKLIHALIARGLLARTQAWR*