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SCNpilot_expt_1000_bf_scaffold_11972_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(377..700)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Rhizobium sp. RepID=L0NIG3_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 89.0
  • Bit_score: 118
  • Evalue 5.90e-24
Integrase {ECO:0000313|EMBL:EZQ17711.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 85.0
  • Bit_score: 119
  • Evalue 2.80e-24
integrase similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 89.0
  • Bit_score: 117
  • Evalue 2.40e-24

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
GTGCATTGCTTTCTCCCGAGTGTAGGGGTGCGCTGTGGCCAGGTTCACCACGGGAGCGCCACGACGACGGCGGTGGTCCGTCGAGCGATTGAACATCGTAAAGAGACCCTCAGGGCTCTGGCCACGCAGTACGGGTTCAAGCCGGGGACCGTGGCGAAGCGGAAGAAGCGAAGCTCGACGGTTGATCTTCCGTCCGGGCCGAAGGAGCAGCACTCACCGGCTCTCGCATTTTTTGAGGAGGCGATCATCGTGGCCTTCCGCAATCACAGTCTGCTGCCGCTTGATGACTGCCCTATGCGCTTCAACCGACAATCGCGCACCTGA
PROTEIN sequence
Length: 108
VHCFLPSVGVRCGQVHHGSATTTAVVRRAIEHRKETLRALATQYGFKPGTVAKRKKRSSTVDLPSGPKEQHSPALAFFEEAIIVAFRNHSLLPLDDCPMRFNRQSRT*