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SCNpilot_expt_1000_bf_scaffold_2684_1

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 6 BSCG 50 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 547..1215

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein n=1 Tax=Pseudomonas sp. CFII64 RepID=S6IID9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 222.0
  • Bit_score: 109
  • Evalue 4.30e-21
Extracellular solute-binding protein {ECO:0000313|EMBL:EPJ84834.1}; TaxID=911242 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CFII64.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 222.0
  • Bit_score: 109
  • Evalue 6.10e-21
peptide/nickel transport system substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 230.0
  • Bit_score: 104
  • Evalue 5.70e-20

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Taxonomy

Pseudomonas sp. CFII64 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GTGCGCCAGGCCCTGGCCTATGCCTTCGACCGCCAGGGCTACACCAAGACGGTGTGGTTCGGCTTCGCCCGGCCGACGATCAACCCGGTGCCGCCGGAAATGGCGACCTACCTGCCGGACTCCACTGACCGCTACGCCTTTAACCTCGACAAGGCCGCGGCGCTTCTGGCCGAGGCGGGCTTCACCAAGGACAAGCCGCTGAAGCTGGAGATCCTGACGCCGACCGGCTTCGATTCGCTGAAGTCGATGGCGCTGATCCTGCAGGACAATCTCAACCGCATCGGCCATAGCGTGACCATCCGCGAGCTGGAGATCACGGTGTGGATCGACCGCATCCTGACCAAGCCCGACTACGACCTCACCACCAACAACTACAACACCGGGCCCGAGGATCCGGCTTCGATGTTCAACTCGCCCAACCTCGCGCCCAAGGCCAATGTCAGCCTGTGGAACCCGCCCGGCTATGCCGATCTGGTGGCGAAGGCGGCGGCCGAGATCGATCCGAAGAAGCAGATCGACCTCTATCATCAGCTGCAGGAATTGCTGCTCGAGGAGATGCCGCAGCTCACCGTCGACCATCTGCCGCTGTTCTTCCTCGGCAACGAGGCGGCGAAGTCGCTTGTCATCGGGCCGAGCGGCATCGACAACTATTCGCGGATCGCGCTGTAA
PROTEIN sequence
Length: 223
VRQALAYAFDRQGYTKTVWFGFARPTINPVPPEMATYLPDSTDRYAFNLDKAAALLAEAGFTKDKPLKLEILTPTGFDSLKSMALILQDNLNRIGHSVTIRELEITVWIDRILTKPDYDLTTNNYNTGPEDPASMFNSPNLAPKANVSLWNPPGYADLVAKAAAEIDPKKQIDLYHQLQELLLEEMPQLTVDHLPLFFLGNEAAKSLVIGPSGIDNYSRIAL*