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SCNpilot_expt_1000_bf_scaffold_9000_4

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 6 BSCG 50 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 3362..4240

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGI8_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 299.0
  • Bit_score: 509
  • Evalue 2.50e-141
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 299.0
  • Bit_score: 509
  • Evalue 7.70e-142
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY66692.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 299.0
  • Bit_score: 509
  • Evalue 3.50e-141

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Taxonomy

Mesorhizobium sp. LNHC232B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGATCGACAAGCTGGAATTCTTCATCGCGCTCGCCAAGGAGGAGCATTTCGGCCGCGCCGCGGACGTGTGCGGTGTCACCCAGCCGACGCTCTCGGCCGGCATCAAGCAGCTCGAGGCACAGCTCGGCGTCATGCTGGTGTTGCGCGGCTCGCGCTTCCAGGGCCTGACGCCCGAAGGCAAGCAGGTGCTGGTGTGGGCACGCCGCATCGTCGGCGATTCCAGGACGATGCGCGAGGAAATGCGCGCGGCGCGCCTTGGCCTGTCCGGGCGCATACGCATTGCCGCGATCCCCACCGCGCTCGCCATGGTGGCGCGGCTGACGACGCCGTTTCGTGAAAAACACCCCGGCGTCACCTTCTCGGTGCTGTCGCGCACCTCGATCGAGGTGCTGACGCTGCTTGGCAATTTCGACGTCGATGCCGGCATCACCTATCTCGACAACGAGCCGCTCGGCCGGGTGACCAGCGTGCCGCTCTATGACGAGCGCTACCAGCTGATCACGGCGGTCGGGAATCCCTATTTCGACCGCGACAAAGTGACGTGGTCGGAATTGAGCCATTTGCCGGTCCGGATGTGCGAAAACAGCACGATCATCGAATTGGATTCCAGCGTCGGGCGCACCTGCACGCCGGCCTCCAATTCGATGATCGTGCTGTTTTCGCACATCCGGACCGGCAAATGGTCGTCGATCATGCCGCTCAACCTCGCGGAAACATTCGGTTTTTCCGAGCCGATCCGGGCCATCCCGATCGTCGAGCCCGACGCCAGCCACACGGTCGGGCTTGTCGCGGCTCCGCGCGAGCCGCACACCCCGCTGGTGCAGGCGCTACTGGACGAGGCGATGGCGCTGGCAGACGATATCCGTTTCCACCGCTAG
PROTEIN sequence
Length: 293
MIDKLEFFIALAKEEHFGRAADVCGVTQPTLSAGIKQLEAQLGVMLVLRGSRFQGLTPEGKQVLVWARRIVGDSRTMREEMRAARLGLSGRIRIAAIPTALAMVARLTTPFREKHPGVTFSVLSRTSIEVLTLLGNFDVDAGITYLDNEPLGRVTSVPLYDERYQLITAVGNPYFDRDKVTWSELSHLPVRMCENSTIIELDSSVGRTCTPASNSMIVLFSHIRTGKWSSIMPLNLAETFGFSEPIRAIPIVEPDASHTVGLVAAPREPHTPLVQALLDEAMALADDIRFHR*