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SCNpilot_expt_1000_bf_scaffold_1422_20

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 23079..24512

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion-associated protein, BMA_A0400 family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWX6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 497.0
  • Bit_score: 315
  • Evalue 8.50e-83
Type VI secretion-associated protein, BMA_A0400 family {ECO:0000313|EMBL:EIL91717.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 497.0
  • Bit_score: 315
  • Evalue 1.20e-82
type VI secretion-associated protein, BMA_A0400 family similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 402.0
  • Bit_score: 212
  • Evalue 4.20e-52

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGTCCGGTCTCGGCGGCACGGGATTTTTCGGCAAGCTGCCGGGCGTGGGCGACTTCATGCAACGGCGCTTGCCGGCGGGTTTCGTCGCGGCCTGGGATGCCGCGTTCGAGTCGGCCGTCAACGCGGCGCGCAACGGTTTCGGCGCAGACTGGCAGGCAGCGTGGCAGGCCGCTCCCGTTTGGCGCTTCGCGTTGATGCCGGGCGTGTGCGGCGATTCGGCGTGGGTCGGCGTGATGGGACCGTCCACGGACCGCGTCGGCCGCGGATTTCCCATGGTGCTCGCGTACGCCATCGATGATGCAACGGCACTCGCCCGCGTGGTGGCCGCTGCTGGCGGCTGGTTCGCCGCGGCTGAAGACGTGTGTCGACATGCGCGTGCCGGCACGGCCACCACGGAAACGTTCGACGCGATGGTGTGCGCGCTGCCGGGTCCGCGCGCCTGGCTGGAGGAAGGCGCCACCGAAGCCGCTGCCTGGCGCGACACGCTGCAGGTTGCGTGGCGGCGGAATGCCGAAGATCGCCAGCTCGCGGCGCTGTGGGCGCGCTGCCGCGAAGCCGGCGACGGCTGCATGTGGTGGACGAGCGGCAGCGCCCGCACGACGCCGTCCGTGCGGTTGACGCATGGCCTGCCGGCAGCCCATGACTACGCGACTTTTCTCGCCGACGCCACAGCCGGCTTGCACGTGCAAACCGGCGCCGCATTCGCACCGCTTCCAGCAGGTGCGGATTCCCTTGGCGCGATGTCGGCCGCGACGTCGACCGGCGACATCGATGACGTGCTTGCCGATTTGCTCGCGCCTCCGCAGCCTGCACTGGCCGATGCACCGGTTGCGGACGGGCGTGATGGCGACCCACGTGCGGAGACGGAGCGCCCGAATGCACAGGCGCGCGCGACAGAACCGGTCGCGTCCCGGGTCCAAGGCCGGATCACCCTGATTGCGGCCGACAACGGCCCAACCGATCCGCGTCGATCCGCCGCCGCACGCGTCACGGAAGCGCTGGCCGATCCGGCGGCGCTGGCCGACATGCAGCATGTGCGGGATTGCCTGATGGCGCTGCATCCGCAACTGCACGCGCGCAGCGAGGACCTGATCGATCCCGTATCCGAGGACGCTGCGCTGGTGGTTGCGCGCATCACGGACGATTGCGTCGAGTTGCTGCGCGCAGGAGCTGCCGGCGCGTGGCATTGGCGCCGTGGGCAACTGCGTCCGCTGTTCGTGGCGGACGCCGATCCGGCGGTCGACGAGGCCGAAACCGTGCAACCGGGAGACCTCTCGGGCATCCTGTCGCAACCAGTCGCGAGGCCTGCGCCCGGCATCGGCGCGGCGGACAACTTGCGCCTGGACGAAACGCGTTGCACGGTCGTGAGCGGCGACCGGTTGCTGCTGATGGCGACTGATACACTCGTGCGGCTTCCGGAAGATGCGCTCGCA
PROTEIN sequence
Length: 478
MSGLGGTGFFGKLPGVGDFMQRRLPAGFVAAWDAAFESAVNAARNGFGADWQAAWQAAPVWRFALMPGVCGDSAWVGVMGPSTDRVGRGFPMVLAYAIDDATALARVVAAAGGWFAAAEDVCRHARAGTATTETFDAMVCALPGPRAWLEEGATEAAAWRDTLQVAWRRNAEDRQLAALWARCREAGDGCMWWTSGSARTTPSVRLTHGLPAAHDYATFLADATAGLHVQTGAAFAPLPAGADSLGAMSAATSTGDIDDVLADLLAPPQPALADAPVADGRDGDPRAETERPNAQARATEPVASRVQGRITLIAADNGPTDPRRSAAARVTEALADPAALADMQHVRDCLMALHPQLHARSEDLIDPVSEDAALVVARITDDCVELLRAGAAGAWHWRRGQLRPLFVADADPAVDEAETVQPGDLSGILSQPVARPAPGIGAADNLRLDETRCTVVSGDRLLLMATDTLVRLPEDALA