ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2259_17

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(16244..16648)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 n=2 Tax=mine drainage metagenome RepID=T1B3I5_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 134.0
  • Bit_score: 233
  • Evalue 1.60e-58
Translation initiation factor IF-3 {ECO:0000313|EMBL:EQD64447.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 134.0
  • Bit_score: 233
  • Evalue 2.20e-58
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 133.0
  • Bit_score: 215
  • Evalue 8.20e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 405
ATGGCAGAGGATGCCGGTCTGGATCTGGTCGAGATCCAGCCGACCGCGGAACCGCCCGTGTGCCGGATCATGGATTTCGGCAAGTTCAAGTTCGAGCAGCAGAAGAAGGCGCACGCTGCGCGCAAGAAGTCGAAACAGATCGAAATCAAGGAATTGAAGTTCCGCCCGACCACGGATGTCGGCGACTACAACATCAAGCTGCGCAACATGCTGCGGTTCCTGGAAGAAGGCGACAAGGTCAAGGTCAACATCCGTTTCCGCGGCCGCGAGATGTCGCACCAGGAACTGGGCATCGAGCTGGCCCGGCGCATCCAGAACGACATCGCCGAGCAGGCGGTGGTGGACCAGTTCCCGCGCATGGAAGGGCGCCAGATGACCATGATGATCAGCCCCAAAAAGAAGTAG
PROTEIN sequence
Length: 135
MAEDAGLDLVEIQPTAEPPVCRIMDFGKFKFEQQKKAHAARKKSKQIEIKELKFRPTTDVGDYNIKLRNMLRFLEEGDKVKVNIRFRGREMSHQELGIELARRIQNDIAEQAVVDQFPRMEGRQMTMMISPKKK*