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SCNpilot_expt_1000_bf_scaffold_10223_2

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 544..768

Top 3 Functional Annotations

Value Algorithm Source
antimicrobial peptide ABC transporter permease n=1 Tax=Dyella ginsengisoli RepID=UPI00034A0F89 similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 74.0
  • Bit_score: 117
  • Evalue 5.30e-24
ABC-type antimicrobial peptide transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 74.0
  • Bit_score: 113
  • Evalue 4.10e-23
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87974.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 74.0
  • Bit_score: 113
  • Evalue 1.80e-22

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGGTCGGGTTGGCTGGCGGCGCACTGGGCTTGCTGCTCACGTGGCTGGGCATCGTCGGCGTCGGCTGGGTACTGCCGCGCGACATCGCCGACCTGGCGCGACTGGACGTATCGCTGTTCGCGACCACGCTTGCGGTGGCGATCGTGGCGACGATGCTGGCCGGCCTCTATCCCACCATGCGCGCGGCGGCGGTGCAGCCGGCGTGGCAGTTGAAATCGAATTGA
PROTEIN sequence
Length: 75
MVGLAGGALGLLLTWLGIVGVGWVLPRDIADLARLDVSLFATTLAVAIVATMLAGLYPTMRAAAVQPAWQLKSN*