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SCNpilot_expt_1000_bf_scaffold_10223_3

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 779..2038

Top 3 Functional Annotations

Value Algorithm Source
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 425.0
  • Bit_score: 551
  • Evalue 6.20e-154
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90150.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 425.0
  • Bit_score: 551
  • Evalue 8.70e-154
ABC-type antimicrobial peptide transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 424.0
  • Bit_score: 531
  • Evalue 2.10e-148

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGACACTCCACCCCATCCTTGCGGCGCTGAAGAAGCACAAGGCCGGCGTCACGCTGATCACCCTGCAGATCGCGTTGACGCTGGCGATCGTGTGCAACGCGGTGTTCATCATCGGCCAGCGCGTCGACCGCATCAATCGCCCCAGCGGCATCGACGAAAACAACCTGTTCCTGGTCACGCAAAGCTGGGTCGGCGCGCCGACCGGCGACGACGAGGGCAGCATCGACAAGCTCGATTCGATGCAACAGGCCGACGTCGCGACCTTGCGCAATCTGCCGGACGTCGAATCCGCGATCGCCGTCAACACGTTGCCGCTGGTCAACAGCACCTGGAGCACGGGCATCAGCCTCAAGCCCGACCAGCAACGTTCGACCGCGCAGGCGGCGCTCTACTTCGGCACCGAGCAGATGGTTCCCACGCTGGGGCTCAAGCTGGTCGCGGGCCGCAATTTCACTTCCGCGGAAATCGGCCACATGGGGTTCCGTGGCCACAACAAGCCGCCCGTGATCATCGTCACCAAGGCCCTGGGCGACAAACTGTTCCCGAAAGGCGACGCGTTGGGCAAGACGGTTTACATCGATCGCAATCCCACCACCATCGTCGGCATCGTCGAACGGATGCAGGTGCCGAGCGTGAACAGCTGGGCCAACAGCTGGTTCTGGAATTCGGTGCTGATTCCCACGCGGCTGGATGCCGGCTTCTCCCGCTACGCGGTGCGCGCCAAGCCCGGCCGCCTCGACGCCGCGATGCGCGAGGCGCCCAAGGCGCTGTATGCGTCCAATCCGATGCGAGTGATCGAAACCGGCGCCAAATTCGAAGACAAATCTGTGCATTCGTTCGCCGAGATCCGCAGGTACGCCTATCGCGCCGACCGCGGCATGGCGGTCCTGATGGGCGTGATCTGCCTGATCCTGCTGTGTGTCACCGGCGCGGGCATCGTCGGCCTCACCAGCTTCTGGGTGGGCCAGAGGCGCAAGCAGATCGGCATCCGCCGCGCGCTGGGCGCAACGCAAGTCGACATCCTGCGTTACTTCCAGACCGAGAACCTGATGATCGCGGGCGTCGGCGTGGTGCTGGGCGCGATCCTCGCGGTCGGGTTGAACCTGTGGTTGATGAAGCAGTTCCAGATGGACCGGATGTCGATCACTTACGTGCTCGTCGGGGTGGTCGTGCTGCTGGTGCTGGGGCAGGGCGCGGTGTTCGCGCCGGCGCGGCGTGCGTCGAAGGTATCGCCGGTGGAGGCAACGCGATCGGTGTGA
PROTEIN sequence
Length: 420
MTLHPILAALKKHKAGVTLITLQIALTLAIVCNAVFIIGQRVDRINRPSGIDENNLFLVTQSWVGAPTGDDEGSIDKLDSMQQADVATLRNLPDVESAIAVNTLPLVNSTWSTGISLKPDQQRSTAQAALYFGTEQMVPTLGLKLVAGRNFTSAEIGHMGFRGHNKPPVIIVTKALGDKLFPKGDALGKTVYIDRNPTTIVGIVERMQVPSVNSWANSWFWNSVLIPTRLDAGFSRYAVRAKPGRLDAAMREAPKALYASNPMRVIETGAKFEDKSVHSFAEIRRYAYRADRGMAVLMGVICLILLCVTGAGIVGLTSFWVGQRRKQIGIRRALGATQVDILRYFQTENLMIAGVGVVLGAILAVGLNLWLMKQFQMDRMSITYVLVGVVVLLVLGQGAVFAPARRASKVSPVEATRSV*