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SCNpilot_expt_1000_bf_scaffold_10225_9

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(8079..8657)

Top 3 Functional Annotations

Value Algorithm Source
Membrane fusion protein of RND family multidrug efflux pump (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRI2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 128.0
  • Bit_score: 175
  • Evalue 4.30e-41
Membrane fusion protein of RND family multidrug efflux pump {ECO:0000313|EMBL:EIL89823.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 128.0
  • Bit_score: 175
  • Evalue 6.00e-41
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 128.0
  • Bit_score: 158
  • Evalue 2.90e-36

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAAGCGTCATCCCGGCTGCGGACCCTGGTTGCATGTTGGGCCCTGTTCGCGCTCGCAGGCTGCGGCAAAGGTGGCCAGGAGGCGCAGCAACCGCCGCCCGAGGTCGGCGTGGTCACGGCGCAGCCTCGAACGGTGCCTTTGACCAAGGACCTGGTCGGGCGGCTCTCCGCCTACCGCAGCGCCGACGTGCGTGCGCGCGTCGCCGGCGTGCTGCTGAAACGGGTGTACACGGAAGGCAGCGAAGTCAAGGCCGGCCAGGTGCTGTTCCAGATCGACCCGGCACCGCTCAAGGCGGCGCTGGCCAACGCGGGGGCGGGACTCGCACAGGCGCAGGCAACCTTCACCAATGCGCGCGTCACGGCGGAGAGGACCCGTGCGNNNNNNNNNNNNNNNNNNNNNNNNTGGCGCCCAAAGGCTACGTCTCCAAATCGGACCTGGACGCCGCGCTGGCCAGCGAGCGCACGGCCAAGGCCGCGGTGCAGGCCGCGCAGGCCAACGTGGAAACCGCGCGCATCAACCTGGGTTACGCCGACGTCACCTCGCCGATCGCGGGACGCGCAGGACAACAACAGGTGA
PROTEIN sequence
Length: 193
MKASSRLRTLVACWALFALAGCGKGGQEAQQPPPEVGVVTAQPRTVPLTKDLVGRLSAYRSADVRARVAGVLLKRVYTEGSEVKAGQVLFQIDPAPLKAALANAGAGLAQAQATFTNARVTAERTRAXXXXXXXXWRPKATSPNRTWTPRWPASARPRPRCRPRRPTWKPRASTWVTPTSPRRSRDAQDNNR*