ggKbase home page

SCNpilot_expt_1000_bf_scaffold_18384_4

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 3983..4333

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter denitrificans RepID=I4WR80_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 114.0
  • Bit_score: 174
  • Evalue 7.50e-41
RNA polymerase, sigma-24 subunit, RpoE similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 114.0
  • Bit_score: 174
  • Evalue 2.40e-41
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:AGG89348.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 114.0
  • Bit_score: 174
  • Evalue 1.10e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
GTGAACACCGCGAAGAACCACCTGGTCGCGCAGGGCAGCCGGCCGCCGGCCGAGGACATCGATGCGGACACCGCCGTCCAGTTCGACGCTGGCGCCCGCCTGCGCGACGAAGCCACCCCCGAACACGAACTGGCCCGCCGCGAGATTGAACAAACCGTGTTCGCCACGGTCGAAAAGCTGCCGGAAGAATTGCGCGACGCGATCACCCTGCGCGAGGTCGAGGGATTGTCCTACGAGGAAATCGCCGAACGCATGGGCTGCCCGATCGGCACGGTGCGTTCGCGCATTTTCCGGGCCCGCGAGGCGATCGACGAGAAACTGCGCCCGCTGTTGTCCGACGATGCCGCCTGA
PROTEIN sequence
Length: 117
VNTAKNHLVAQGSRPPAEDIDADTAVQFDAGARLRDEATPEHELARREIEQTVFATVEKLPEELRDAITLREVEGLSYEEIAERMGCPIGTVRSRIFRAREAIDEKLRPLLSDDAA*