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SCNpilot_expt_1000_bf_scaffold_15762_1

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(2..1930)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 644.0
  • Bit_score: 900
  • Evalue 1.20e-258
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 646.0
  • Bit_score: 886
  • Evalue 5.10e-255
Ribonuclease R n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIR1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 619.0
  • Bit_score: 900
  • Evalue 8.30e-259

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Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1929
ATGCGTTCGCGCACGCCGGCCGCGAAGAATCCGCATGCGCGTGAGCACGGCAAGCCGCATGGCGGCTTCGTCGATCCGCACGCCGAGCGCGAGGCGCGGCGCTACGAACATCCCATACCGAGTCGCGAGGCGATCCTCGCATTGCTGGCCGAACGCGGCAGCCTGTTGCGTGCGGATGCCATCGCCGAAGCACTGGGCATCCGTGACGATGTGCGCCGCGAGGCGCTCGACAAGCGCCTGCGCGCGATGCTGCGCGATGGCCAGTTGCTGGAAAGCCGTCGCGGCGGCGTCGCGCCCGCCGAGAAAATCGGCCTGATCACCGGCACGGTGCTGGCCAACGCGGAAGGCTACGGGTTCCTGCGCCCCGACGAGGGCGGCGACGATCTGTATCTCTCGCCGGCGCAGATGCGCCAGGTGCTGCACGGCGATCGGGTGCTGGCGTCGGTGGTCGGCGTCGATCGGCGCGGACGCCGCCAGGGCGCGATCCGCGAAGTGCTGGAACGGCGCGCGCCGCGGCTGGTCGGGCGCGTGGTCGAGGAGCACGGCGTGGTGGTGGTCGATCCCGACGATCGCCGTCTGCACCAGGACGTGCTGATCCCGCACGATGCGCGCAACGGCGCGCGCGCGGGCCAGATCGTGATCGCCGAAATCACCGAACCGCCGACGTCGCAACGTGGACCGATCGGCCGCATCGTGTCGGTGCTGGGCGAGCGGCTGGCGCCTTCGCTGATCGTCGAGATGGCGATCGAGAGCCATGGCCTGCCGCACGAATGGCCAGTCGAGGTGACGCGCGCCGCCGAAGCCGTCGAGCCGCGCGTCACGTCGGCCGAACACGCGGGACGCGTGGACTTGCGCGGCGTTCCGCTGGTGACCATCGACGGCGCCGACGCGCGCGATTTCGACGATGCGGTGTACGCCGAACCGGTGCGTGGCGGCGGCTTCAAGCTGTTGGTCGCGATCGCCGACGTGTCGCACTACGTGCAACCGGAGACCCCGCTGGACGACGAGGCGTACCAGCGCGGGACGTCGGTGTATTTCCCCGGGTTCGTGGTGCCGATGCTGCCGGAGACGCTTTCCAACGGGATCTGCTCGCTGAACCCGGACGTCGAGCGCCTGTGCATGGTCTGCGAGATGCGTGTCGGGGCGACCGGCGAGGTGACCCGATCGAAGTTCTATCCGGGCCTGATGCGTTCGCACGCGCGCCTGACCTATGACGGGGTGTGGCGCGCCATCGGTGAACGCGATGCCGAAGCGCGGCGCGGCCTCGGCAAGCTGCTGCCGCACATCGACCACCTGCACGCGCTATACAAGGCATTCGATGCCGCGCGCAAACGTCGCGGCACCATCGAGTTCGAGACCAGCGAGGTCGACTACCGGCTGGATGACAAGGGCGAGGTGGTTTCGCTGGGTTCCCACGAACGCAACGACGCGCACAAGTTGATCGAGGAATGCATGATCGCCGCCAACGTCGAGGCGGCGAAGTTCCTCGCGAAGAAGAAAATCCCCGCGCCGTTCCGGGTGCACGCGCCGCCGCCCGCCGACAAGTACGAAGACCTGCTGGCTTTCCTGCGCGAATACAAGTTGAAGCTGCCGCCGGTCAGCGAAGTGCGGCCGCGCGATTTCGCTGCGCTGCTGAAGCGTGTGGCGGACCGCCCCGACGCCGAGTTGTTCCGCAGCGTACTGCTGCGCGCGCAAAGCCTCGCCAGCTACCAGCCGGCCAACCACGGGCACTTCGGCCTGGCGCTGGACGCCTACGCGCATTTCACCTCGCCGATCCGGCGTTATCCCGATTTGCTGGTGCACCGCGCGATCCGCTACGCGCTGGCGGGCGGCAAGCCGGCCGCGTACCTGTACACCGAGAGCAAGATGGCGACCATGGCCGCGCACTGCTCGCGCACCGAGCGGCGCGCCGAGGAAGCCGAGCGCGAC
PROTEIN sequence
Length: 643
MRSRTPAAKNPHAREHGKPHGGFVDPHAEREARRYEHPIPSREAILALLAERGSLLRADAIAEALGIRDDVRREALDKRLRAMLRDGQLLESRRGGVAPAEKIGLITGTVLANAEGYGFLRPDEGGDDLYLSPAQMRQVLHGDRVLASVVGVDRRGRRQGAIREVLERRAPRLVGRVVEEHGVVVVDPDDRRLHQDVLIPHDARNGARAGQIVIAEITEPPTSQRGPIGRIVSVLGERLAPSLIVEMAIESHGLPHEWPVEVTRAAEAVEPRVTSAEHAGRVDLRGVPLVTIDGADARDFDDAVYAEPVRGGGFKLLVAIADVSHYVQPETPLDDEAYQRGTSVYFPGFVVPMLPETLSNGICSLNPDVERLCMVCEMRVGATGEVTRSKFYPGLMRSHARLTYDGVWRAIGERDAEARRGLGKLLPHIDHLHALYKAFDAARKRRGTIEFETSEVDYRLDDKGEVVSLGSHERNDAHKLIEECMIAANVEAAKFLAKKKIPAPFRVHAPPPADKYEDLLAFLREYKLKLPPVSEVRPRDFAALLKRVADRPDAELFRSVLLRAQSLASYQPANHGHFGLALDAYAHFTSPIRRYPDLLVHRAIRYALAGGKPAAYLYTESKMATMAAHCSRTERRAEEAERD