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SCNpilot_expt_1000_bf_scaffold_33724_3

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(902..1780)

Top 3 Functional Annotations

Value Algorithm Source
putative amino acid permease; K03759 arginine:agmatine antiporter id=12557355 bin=CNBR_ACIDO species=Pseudomonas alcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 280.0
  • Bit_score: 264
  • Evalue 1.80e-67
arcD; arginine/ornithine antiporter similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 303.0
  • Bit_score: 242
  • Evalue 2.30e-61
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 282.0
  • Bit_score: 262
  • Evalue 9.60e-67

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 879
GTGCAGGTGACGACGACGATCCTGAAGGTATTGCCGTTGCTGGTGCTGGCCGTGTTCGGCCTCGCGCACTTCAATCCGCAATTGCTGGTGCCCGGCCCCCAATCGGGTCCGCCGATGCACGCCATCAGCCTGTGCGTCACCGCAACGCTGTTCGCCTTCCTCGGCGTGGAGTGCGCGACGATCCCGGCCAACCACGTGCGCGATCCCGAGAAAACCATCCCGCGCGCCACGCTGCTCGGGGCCTTGATCGCGGCATTGGTTTACATCGCCTGCACCGCAGCGGTACTGGGCCTGATCCCGGCCGCGCAACTCGCGCATTCGAACGCGCCGTTCGCGGATGCCGGCCGCCTGTTGTGGGGCGACTGGGCCGCATGGTTGATCGCCGGCGTCGCGGCGATTTCCTGCTTCGGCGCGCTGAACGGCTGGATCATGATCGCCGGGCAATATCCCCACGCGATAGCGCGTGACGGACTGCTGCCACGTTTCTTCGCGGGCGAATGCCGGCGCGGCACGCCAGCCCAGGCGCTGTTGTTCGCGGCGGCCTTCAGCAGCCTGCTGGTGCTGGCGAATTACACCCGTGGCCTGGTGGCAATGTTCACCTTCATCGTGTTGTTGTCGACCCTGGGTTGCGTGATCGCCTACCTGTTCTGTGCGATGGCCGACATCGTGCTCGCCCGCCGCGCCGCGAGCCCGGCGCCATGGCGCAACCTCGTCCTGGCGTGCGGCGGGTTCGCGTTTTCGGTGCTGGCAGTGATCGGCGCCGGCCAGGAAGCGGTGTACTGGAACTTCATCCTGCTGATCACCGGCATTCCGCTGTATGTGTGGCTGGCGCGGAGCGGAAAGAACGCGGCCACACCAGAACCTGGTGCGCCGCGTTAA
PROTEIN sequence
Length: 293
VQVTTTILKVLPLLVLAVFGLAHFNPQLLVPGPQSGPPMHAISLCVTATLFAFLGVECATIPANHVRDPEKTIPRATLLGALIAALVYIACTAAVLGLIPAAQLAHSNAPFADAGRLLWGDWAAWLIAGVAAISCFGALNGWIMIAGQYPHAIARDGLLPRFFAGECRRGTPAQALLFAAAFSSLLVLANYTRGLVAMFTFIVLLSTLGCVIAYLFCAMADIVLARRAASPAPWRNLVLACGGFAFSVLAVIGAGQEAVYWNFILLITGIPLYVWLARSGKNAATPEPGAPR*