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SCNpilot_expt_1000_bf_scaffold_1571_10

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(7648..9060)

Top 3 Functional Annotations

Value Algorithm Source
smeF; outer membrane transport protein involved toxic tolerance id=12493218 bin=THIO_HI species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 471.0
  • Bit_score: 885
  • Evalue 2.70e-254
  • rbh
smeF; outer membrane transport protein involved toxic tolerance similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 476.0
  • Bit_score: 674
  • Evalue 2.90e-191
  • rbh
Outer membrane protein oprM {ECO:0000313|EMBL:CAL62514.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 476.0
  • Bit_score: 674
  • Evalue 1.30e-190

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Taxonomy

Herminiimonas arsenicoxydans → Herminiimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGACTAAATCCATGCGCACTTCCCTGGCGCTGGCGGCCGCGCTGCTGGCCGGCGGTTGCACCATGCTGGAGCCGAAGCTGCCGCAAGCCAATCCGGCCATTCCGGCCGACTGGCCGCTGCCGCCGACGGCGACCGCGACGGCCACGTCCGCCGCGACGGACAAGCCGGTCGCCGACATCGGCTGGCGCGATTTCTTCACCGATCCGAAGCTGGAAGCGCTGATCGCCCGTGCCCTCGACAACAACCGCGACCTGCGCGTGGCGGTGCTGAACGTCGAGCGCGCCCGCGCCCAGTACAACATCCAGCGCGCCGACCGCTTCCCCTCGGTCAGCGCCAATGCCGGCCTGACCCGTACCGGCGGCAATGTCACCACCCCCGGCGATATCTACGCGGCGTCGGTCGACGCGGCCTTCGAACTGGACCTGTTCGGCCGTGTGCACAGCCTCAGCAACGCCGCGCTGCAACGCTACTTCGCCCAGGAAGAAGCGCGCCGCAGCGCCCAGCTTGCCCTGATTGCCGAAATCGCCAATGCCTATCTGAGCCTGGCGACCGATCTGGAGTCGCAGCGGGTGGCGCAGGCCACGCTGGACACCCAGCAACAGTCCTACGAGTTGATCGTCAAGCGGCATGCGGCGGGCGCGGTATCCGCGCTCGACCTCGCCCAGGCGCGAACCACGGTGGAAACCGCCCGTGCCGACGTCGCCCGTTTCGCCGGCCTGGTGGCGACCGACCTCAACGCCCTGCGCTTGCTGGTCGGCGCGCCGATCGAGCAAGCCCTGCTGCCGCAGCACTTCGATCCGGCCGTGTCGGGTCTGGCGCCCTTGCCCGCGCAACTGCCGTCGGAAGTCCTGCTTCGCCGCCCCGACGTGCTGCAGGCCGAGCACCTGCTGCGCGGCGCCAACGCCAACATCGGCGCCGCCCGCGCCGCCTTCTTCCCGTCGATTTCGCTCACCGGCAGCATCGGCACCGCCAGCAACGAACTGTCGGGCCTGTTCGATGGCGGCACCCGCACCTGGAGCTTCATCCCGCAGATCAATCTGCCGATCTTCCAGGGCGGACGCCTGACCGCCAACCTGGGCGTGGCCCAGGCCGATCGCGATATCGCCCTGGCGCAATACGAAAAATCGATCCAGTCGGGCTTCCGTGAAGTGGCCGACGCGCTGGCGCTGAGCCGCACCCTGGCCGATCGCCGCACCGCCCAGCAAGCCCTGCTCGATGCGGCCAGTGAGGCTCATGAATTATCCAGGGCGCGCTACGAGCGCGGCGTCGACAGTTACCTCAACCTGCTGGATGCGCAGCGCAGCCTGTATGCCGCACAGCAGGGCCTGGTCACGGCGCAACTGGCCGAACAGAGCAATCGTGTCACGCTGTACAAGGTGCTGGGCGGCGGCTGGGCAGAGGGCGCGCGATGA
PROTEIN sequence
Length: 471
MTKSMRTSLALAAALLAGGCTMLEPKLPQANPAIPADWPLPPTATATATSAATDKPVADIGWRDFFTDPKLEALIARALDNNRDLRVAVLNVERARAQYNIQRADRFPSVSANAGLTRTGGNVTTPGDIYAASVDAAFELDLFGRVHSLSNAALQRYFAQEEARRSAQLALIAEIANAYLSLATDLESQRVAQATLDTQQQSYELIVKRHAAGAVSALDLAQARTTVETARADVARFAGLVATDLNALRLLVGAPIEQALLPQHFDPAVSGLAPLPAQLPSEVLLRRPDVLQAEHLLRGANANIGAARAAFFPSISLTGSIGTASNELSGLFDGGTRTWSFIPQINLPIFQGGRLTANLGVAQADRDIALAQYEKSIQSGFREVADALALSRTLADRRTAQQALLDAASEAHELSRARYERGVDSYLNLLDAQRSLYAAQQGLVTAQLAEQSNRVTLYKVLGGGWAEGAR*