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SCNpilot_expt_1000_bf_scaffold_1571_13

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 13758..14318

Top 3 Functional Annotations

Value Algorithm Source
yfjP_[H]; HhH-GPD base excision DNA repair family protein; Probable 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase id=12493221 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 187.0
  • Bit_score: 378
  • Evalue 3.20e-102
  • rbh
yfjP_[H]; HhH-GPD base excision DNA repair family protein; Probable 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 186.0
  • Bit_score: 325
  • Evalue 1.30e-86
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 187.0
  • Bit_score: 342
  • Evalue 2.70e-91

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGGCCGCGCTGATCGCCCGCTACCCGGACGCCATCCTGGCTGATCGAGGCGACCCGTTCCAGACGCTGGCGCGCGCCATCGTCGGCCAGCAGATTTCAGTCAAGGCCGCCGACAGCATCTGGACACGCTTTGCCGGCTACGTCAAGCATGTGGCGCCCGGACATGTCGCCGCGCTCGAATTGGACAGCCTTGCGGCATGCGGACTGTCACGCCGCAAGGCCGAGTATCTGCGTGATCTCGCCACGCACTTCGTCGATGGCCGCGTCGAACCGGCGCGCTGGAAAAAGATGGACGACGAGGCGGTGATCGCCGAACTCGCCGACGTGCGCGGCATCGGCCGCTGGACCGCCGAGATGTTCCTGATCTTCAGCCTGCGCCGCCCCGACGTCTGGCCGATCGACGACATCGGTCTGCAGAAAGCCGTTGCGCTGCATTACCTGGGCAATCAACGGCCCACCCCCAAAGCGCTGCGCCAGCACGGCGAGCGCCACGCGCCCTGGCGTACCGTCGCCACCTGGTATCTGTGGCGCAGCCTCGATCCAGTGGTGGTGCAGTACTAG
PROTEIN sequence
Length: 187
MAALIARYPDAILADRGDPFQTLARAIVGQQISVKAADSIWTRFAGYVKHVAPGHVAALELDSLAACGLSRRKAEYLRDLATHFVDGRVEPARWKKMDDEAVIAELADVRGIGRWTAEMFLIFSLRRPDVWPIDDIGLQKAVALHYLGNQRPTPKALRQHGERHAPWRTVATWYLWRSLDPVVVQY*