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SCNpilot_expt_1000_bf_scaffold_1887_9

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(10093..10557)

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase CspR; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] id=12493751 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 155.0
  • Bit_score: 312
  • Evalue 2.30e-82
  • rbh
RNA methyltransferase CspR; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 153.0
  • Bit_score: 263
  • Evalue 5.10e-68
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 155.0
  • Bit_score: 269
  • Evalue 2.40e-69

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGTTTGACATTGTTTTGTTTCAGCCGGAAATTCCGCCCAACACCGGCAACCTCATCCGCCTCGCGGCCAACACGGGCTGCCGTCTGCATCTGGTCGAGCCGCTGGGATTCGACCTGTCGGACAAGCAGGTGGCGCGCGCCGGGCTGGATTACCACGACATGGCCTGCGTTACGGTGCATCCCGACTGGGCTGCGGTGCGGGCGGCACTGGCAGGTCGACGCTGGTTCGCGCTCACCACCAAAGGGGATACACGCTATGCCGGGACCGCGTTCCAGGCGGACGATGTGCTGCTGTTCGGCCCCGAGTCGCGCGGGCTGCCTGCGGAGATTCTGGCGCAGTTCGACGCGGACCGCCGGCTGCGCCTGCCGATGCTGCCCGGCTCGCGCAGCATGAACCTGTCCAACGCCGTCAGTGTGGTCGTGTTCGAAGCCTGGCGGCAAAACGGGTTTTACGGGGCGATCTGA
PROTEIN sequence
Length: 155
MFDIVLFQPEIPPNTGNLIRLAANTGCRLHLVEPLGFDLSDKQVARAGLDYHDMACVTVHPDWAAVRAALAGRRWFALTTKGDTRYAGTAFQADDVLLFGPESRGLPAEILAQFDADRRLRLPMLPGSRSMNLSNAVSVVVFEAWRQNGFYGAI*