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SCNpilot_expt_1000_bf_scaffold_3104_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2..304)

Top 3 Functional Annotations

Value Algorithm Source
putative squalene/phytoene dehydrogenase id=12493537 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 101.0
  • Bit_score: 195
  • Evalue 2.10e-47
putative squalene/phytoene dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 103.0
  • Bit_score: 96
  • Evalue 7.00e-18
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 101.0
  • Bit_score: 150
  • Evalue 1.40e-33

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
TTGCTGCCTGCGCCCGCCGCGGCGCAAGTGGCCGAACTCGGCAGCGCCATCCGCCTGGGCTGCCGCGTGACCCGGGTCGATGCCACGCAGGACAGCGTCACGCTGGGTACGCATGACAATACCTCGGCCTACAGCCATGTCATTCTCGCTGTGGCGCCGCAACACCTGCCGGCGCTGGCGATGCAGGTACCGGCGCTCGAACCGCTTGGCCGCGCCGTGTCACGTTATAGCTATCAGCCCATTGCCACCGCCTACATGCAATACGATCCGGCGTTCCGGCTGTCGAGGCCACTGTTCGCACTG
PROTEIN sequence
Length: 101
LLPAPAAAQVAELGSAIRLGCRVTRVDATQDSVTLGTHDNTSAYSHVILAVAPQHLPALAMQVPALEPLGRAVSRYSYQPIATAYMQYDPAFRLSRPLFAL