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SCNpilot_expt_1000_bf_scaffold_4493_12

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(7120..8067)

Top 3 Functional Annotations

Value Algorithm Source
sigma E regulatory protein, MucB/RseB; K03598 sigma-E factor negative regulatory protein RseB id=12493446 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 316.0
  • Bit_score: 626
  • Evalue 1.10e-176
  • rbh
sigma E regulatory protein, MucB/RseB; K03598 sigma-E factor negative regulatory protein RseB similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 318.0
  • Bit_score: 433
  • Evalue 4.50e-119
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 296.0
  • Bit_score: 543
  • Evalue 2.30e-151

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGCGATCGCTGGCCGGATGGCGACAGGACTGGCTCATTGCAGTATTCGCCGGACTGGCATTGCTGTCCGGCGGGGCACGTGCCGATACCGCGGCCGATTGGCTCAACCGCGCGGCCGCAGCCGCCAAACAGCAGAATTACAGCGGCGTCTATGTCTACCATCATGGGGAACATATCGAGGTGCTGCGTGTGCTGCACCGCGCCGATGCGAGTGGCGAGCAGGAAAAAGTCGAAGTCATGGATGGCACGTCGCGCCAGTTCCTGCGGATCAACAATGACGTGTACTGCCACTTGCCGGACGGCAAGCATGTCCGTCTGGAGCGCAATGCGCTGCGTCGATTCTTTCCGGCCCTGCTGCCGGCGCAGCCGGCTGGTCTGCTCGATTTCTATGAAGCGAAACTCGGTGGAATCGAGCGCGTGGCGGGGCGTACCTGCCAGGTGGTGACGCTGACGCCGCGCGACGGTTACCGGTATGCCTACAATCTCTGGCTGGACACGCGTACGGGGCTGCCGCTCAAGGCGCGCATCGTCAATGAGAACGGCAAGGCGATCTCCATCCTCGTGTTCTCGGAAATCCAGATCGGCAAGGCACCCGACATCCGCAACGACATGACGGGAAAAGTCGTCCAGAAAGCCCAGTCAGACAAACCCATCGTCAACGAATGGAAAGTGACCCCGCCCCCAGGGTATGAGCAGATACAGGAGGCGGTACGTTTGCTGAACGGCAAGCGGGCGCCGGTCACGCATCTGGTTTTCTCGGATGGATTGAGCGTGTTGTCCATGTTCGTCGAGCCGGTGGATCCGCAGGTGCAAAGCCTGCATGGCCTGTCGGCCGAAGGCGCGGTCGGTATCTATGCCCGCGAGGTAAACGGTTACATCGTGACCACGCTGGGCGAGGTGCCGAACATGGCACTCATTGAAACCGGCAATTCTGCGACAAGAAAGTAA
PROTEIN sequence
Length: 316
MRSLAGWRQDWLIAVFAGLALLSGGARADTAADWLNRAAAAAKQQNYSGVYVYHHGEHIEVLRVLHRADASGEQEKVEVMDGTSRQFLRINNDVYCHLPDGKHVRLERNALRRFFPALLPAQPAGLLDFYEAKLGGIERVAGRTCQVVTLTPRDGYRYAYNLWLDTRTGLPLKARIVNENGKAISILVFSEIQIGKAPDIRNDMTGKVVQKAQSDKPIVNEWKVTPPPGYEQIQEAVRLLNGKRAPVTHLVFSDGLSVLSMFVEPVDPQVQSLHGLSAEGAVGIYAREVNGYIVTTLGEVPNMALIETGNSATRK*